Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0405 ATGACAAGATTTCCTCACTGGCTCATTTTGAATATATTGGAAAATATGAATTTTGGAGATGGAATTGAGGGGGTACttgctttttttaattcaatcttGCTTCTCAGTCAACTTAATCAACTAGTTGTTATTGCCACCGGATGCAATTCATGTGGCTCTATTTACGATTCGTCTGTGGATAGTAGCCATGGTTCCGATACCAGTGGAATGCCCGCTTTTTATTCTAATTTCTTGCGGAAATTGGAGGAATTCGTCGCAAGGGACGAGCAATTGGCCAAGACCCTGACTCAAGGACCCACTTCTTCTTCACTACTTTCGGGATCCTTGTCCATGCGCTCTTTGTTCGGAGTTTATGTTTGCAAGGATCTCCAGATGGACCAGAACAGTATGTTCCTCATGTATGTGGCAATCATGAATGCAATATTCTCTGCACAGCGTTCTACAGTTCCCATAGACTCTTGCTATATAGGTTCTAACAATTCTGCGTTCCTCAAGCAGGCTTCATACATTACCGGTGGCATATATTACAGGCCACCCCAATTGGATGGTCTTTTTCAATATCTCTCAGTCTGCATTTGGTCAGGCTCAATCAGATGGTGCCTTAGCTGCCAATCGGAAAAGAAAGGCTTCAGATGCATAagGGACTATGAAATGGGAAATGAGGGGCATTCTGCCACACTTCCAGAACACAAAGCAAGGTTGAGCCGTGTATGA 714 0.4258 MTRFPHWLILNILENMNFGDGIEGVLAFFNSILLLSQLNQLVVIATGCNSCGSIYDSSVDSSHGSDTSGMPAFYSNFLRKLEEFVARDEQLAKTLTQGPTSSSLLSGSLSMRSLFGVYVCKDLQMDQNSMFLMYVAIMNAIFSAQRSTVPIDSCYIGSNNSAFLKQASYITGGIYYRPPQLDGLFQYLSVCIWSGSIRWCLSCQSEKKGFRCIRDYEMGNEGHSATLPEHKARLSRV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0405 237 Gene3D von Willebrand factor, type A domain 4 193 IPR036465 -
Sto5g0405 237 Pfam Transcription factor Tfb4 15 192 IPR004600 GO:0000439|GO:0006289|GO:0006355
Sto5g0405 237 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 14 194 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0405 Sto-Chr5 2523929 2528439 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0405 K03143 - gmx:100776751 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0405 5 2523929 2528439 Sto5g0405 5 2523929 2528439 ECH