Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0392 ATGGCTCAAACCTTGCTGCTCATGTCTAGTGTGACTACAAATTATTGTGTAGATTTAAAGAGAGACTCTTTGCTTCAAATCCAGAGTCAAAGACTAAGCCCTAAGTTTTCTCATTTCTTACTCAACTCACTCCCTTCAACTTCAACTTGTTCTTCAACTTCAACTAGTAAATTTACAACTCTTGCTCTCTTCAAATCCAAGACCAAGGCGGCCCCTTCCAAGGTAGTTAAGGCAAAGCCAAAGCCAAAGGTTGAAGATGGCATCTTTGGCACATCAGGAGGGTTTGGTTTTACCAAGGAAAACGAGCTGTTTGTGGGTCGAGTTGCGATGATTGGTTTTGCGGCATCGTTGTTGGGTGAAGGAATTACAGGGAAAGGGATTCTAGCACAATTGAACCTGGAAACTGGAGTTCCCATATACGAAGCAGAACCACTTCTGCTATTCTTCATCCTTTTCACTCTTCTAGGAGCCATTGGAGCTCTGGGTGACCGTGGTCAATTTGTGGATGACCCTCCCGCTGGCATTGAAGGAGCTGTCATTCCTCCTGGAAAAGGCCTCAGATCTGCTCTGGGTCTCAGAGAAGGAgGTCCTCTGTTTGGATTCACCAAAGCGAACGAGCTATTTGTGGGAAGATTGGCTCAATTGGGTTTTGCCTTCTCTTTGATTGGAGAAATCATCACAGGGAAAGGAGCTCTGGCTCAGCTCAACATCGAGACAGGGGTACCCATTAACGAGATCGAACCACTTGTGTTGTTCAATGTCTTGTTCTTCTTCGTCGCTGCTTTGAATCCTGGAACCGGTAAATTCGTGACAGACGAGGAAGAAGACTAG 831 0.4549 MAQTLLLMSSVTTNYCVDLKRDSLLQIQSQRLSPKFSHFLLNSLPSTSTCSSTSTSKFTTLALFKSKTKAAPSKVVKAKPKPKVEDGIFGTSGGFGFTKENELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGQFVDDPPAGIEGAVIPPGKGLRSALGLREGGPLFGFTKANELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFVAALNPGTGKFVTDEEED 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0392 276 Pfam Chlorophyll A-B binding protein 93 221 IPR022796 -
Sto5g0392 276 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 188 - -
Sto5g0392 276 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 199 262 - -
Sto5g0392 276 Gene3D Chlorophyll a/b binding protein domain 140 247 - -
Sto5g0392 276 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 188 - -
Sto5g0392 276 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 199 262 - -
Sto5g0392 276 SUPERFAMILY Chlorophyll a-b binding protein 83 255 - -
Sto5g0392 276 Gene3D Chlorophyll a/b binding protein domain 58 139 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0392 K03542 - rcu:8274074 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0392 5 2451275 2452371 Sto5g0392 5 2451275 2452371 ECH