Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0386 ATGGCTATGCTCTTTCACGCTTCCTTTCCCAGGAAAATCAATATTCGGAAATATTCCTTTTCCGCCGCGATTTTATTCTTCCTAACCCTTCTGACTCCCAAACACTCCCTGCTCTCACTCTCACTCGCCCACCCCATACCTCCTTCCACTTCTTCGGACACTTACGACGTCGCCGAACGGAGATGCTACAATCCGGAAGAAGAGGAGGCGATGACTTCGGCGGGTTGCAAGAACCGGACGCGGCGGGGAACGGCGGCGAGTGAGTGGTCGGCGTGGAGCAAAACGTGCTCGGAGGCGGTTCTGAGCATAGCGCGGCGGCGGGAGACAGGGGAGTGGTTGAAAAACGTGAGAAGAAAGATCCACGAGAATCCGGAGTTGGCTTTTGAGGAATACGAGACGAGCCGTTTGATAAGAGAGGAGTTGGATCTGATGGAAGTTAGTTATCGGCATCCACTTGCTAAAACTGGAATTCGAGCCTGGATCGGCACCGGGGGTCCACCTTTTGTTGCAATCAGAGCTGACATGGATGCGCTTCCTATTCAGGAAGCAGTAGAATGGGAGTACAAATCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTGATTGGTGCTGCCAAGATCTTGAAGAGTCGTGAGCATTTATTGAAGGGAACAGTGATTCTGATATTCCAGCCAGCAGAGGAAGCAGGAAATGGAGCAAAGAGAATGATACAAGACGGTGCTTTGGAGGACGTGGAAGCTATATTTGCAGTTCATGTGTCCCATCAACATCCAACGGCCATGATTGGTTCAAGACCTGGACCTCTTCTTGCTGGTTGTGGTTTCTTCAGAGCTGTGATTAGTGGGAAAAAGGCTCGTGCAGGCAACCCACACCACTCTCTTGATCCTATTTTGGCTGCTTCAGCCATTGTTATCAGCTTACAGGGTATTGTCTCTCGCGAAGCCAATCCATTGGACTCACAGGTTGTGTCGGTCACTTCATTCAACGGAGGCAACAATCTTGACATGATACCAGACACAGTGGTCCTCGGAGGAACCTTCAGAGCTTTCTCCAATACTAGCTTTTACCAGCTTCTTGAAAGAATAGAGCAGGTGATGGTGGAACAGGCCAGTGTGTACAGATGCTCTGCGGAAGTGGACTTCTTTGAGAAAGAATATACCATTTATCCTCCAACAGTTAATGATGATCGAATGTACCAACATGTGAAGAAggtggccatggatttgctggGTCCATCAAATTTCAAGGAAGTTCCACCGATGATGGGTGCGGAAGATTTCTCGTTTTATTCGCAGGTGGTTCCCGCAGCATTCTTCTACATCGGAATAAGGAACGAGACATTGGGGTCTACCCACACAGGACACTCCCCATATTTTATGATCGATGAAGATGTTCTTCCTATAGGAGCTGCAACTCATGCTGCCATTGCAGAGAGGTACCTCATTGAACATGGCTGA 1479 0.4841 MAMLFHASFPRKINIRKYSFSAAILFFLTLLTPKHSLLSLSLAHPIPPSTSSDTYDVAERRCYNPEEEEAMTSAGCKNRTRRGTAASEWSAWSKTCSEAVLSIARRRETGEWLKNVRRKIHENPELAFEEYETSRLIREELDLMEVSYRHPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKSREHLLKGTVILIFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHQHPTAMIGSRPGPLLAGCGFFRAVISGKKARAGNPHHSLDPILAASAIVISLQGIVSREANPLDSQVVSVTSFNGGNNLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVMVEQASVYRCSAEVDFFEKEYTIYPPTVNDDRMYQHVKKVAMDLLGPSNFKEVPPMMGAEDFSFYSQVVPAAFFYIGIRNETLGSTHTGHSPYFMIDEDVLPIGAATHAAIAERYLIEHG 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0386 492 Pfam Peptidase dimerisation domain 283 377 IPR011650 -
Sto5g0386 492 Gene3D Zn peptidases 115 473 - -
Sto5g0386 492 CDD M20_IAA_Hyd 113 488 IPR044757 GO:0009850|GO:0016787
Sto5g0386 492 SUPERFAMILY Bacterial exopeptidase dimerisation domain 279 388 IPR036264 -
Sto5g0386 492 TIGRFAM amidohydrolases: amidohydrolase 115 476 IPR017439 GO:0016787
Sto5g0386 492 Gene3D - 278 396 - -
Sto5g0386 492 PANTHER PEPTIDASE M20 FAMILY MEMBER 67 491 IPR017439 GO:0016787
Sto5g0386 492 SUPERFAMILY Zn-dependent exopeptidases 108 490 - -
Sto5g0386 492 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 67 491 - -
Sto5g0386 492 Pfam Peptidase family M20/M25/M40 170 485 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0386 Sto-Chr5 2405644 2410952 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0386 K21604 K14664 gmx:100800794 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0386 5 2405644 2410952 Sto5g0386 5 2405644 2410952 ECH