Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0383 ATGGCGGATAGGGTTTCGGTTTGCTTGCTCTTCGCGTTTGTTTTGTCTTTGGTCGCATCGTTGCCCTCTCAGATCTCCGCTGATGAAGCAGAAGGCAAGGAGTTTGTGCTCACCTTGGATCACTCTAACTTCTCTGACACTATCAGCAAGCACGATTTCATCGTCGTTGAGTTCTACGCACCGTGgtgTGGCCACTGTAAGAAGCTTGCTCCAGAGTATGAGAAGGCTGCTTCTATCTTGAGCAGTCATGATCCTCCAGTTGTTTTGGCTAAAGTTGATGCCAATGAAGAACAGAACAGAGAACTTGCTACGGAATTTGATGTTAAGGGATTCCCAACAATTAAGATTCTGAGAAACGGGGGAAAGAATGTTCAAGAATACAAAGGTCCTCGAGAAGCAGATGGTATTGTTGAGTACTTGAAGAAACAAAGTGGTCCAGCATCAACTGAAATTAAATCAGCTGATGATGCTAGTGCTTTTATTGGTGAAAATAAAGTTGTTATCGTTGGGGTTTTCCCTAAATTTTCTGGGGAGGAGTTTGAGAACTTCACAGCTTTAACAGAGAAATTGCGATCTGACTATGACTTTGGTCATACCTTGGATGCCAAACACCTTCCACGGGGAGAATCATCTGTTAATGGGCCAATAGTTAGATTATTCAAACCATTTGATGAGCTTTTTGTTGATTTCCAGGATTTCCATTTGGATACTCTAGAGAAGTTTGTTGAAGAGGCCAGTCTACCTATTGTGACAGTCTTTAACAGTGACCCAAGCAATCATCCTTATGTTATCAAATTTTTCAATAGTCCCAATGCGAAGGCAATGCTGTTTATTAACTTCACTACTGAAGAAGCTGATTCTCTCAAATCAAAATACCGTGAAGCTGCTGAGCAATACAGACTAGATGGAATAAGCTTTCTGGTGGGAGATGTTGAAGCTAGTCAAGGTGCCTTCCAGTATTTTGGACTGAAGGAAGATCAGGTGCCTCTAATTATCATACAGCATAATGATGGAACAAAATTTTTGAAGCCAAATTTGGAACCTGAACACATTCCAGCGTGGTTAAAGGATTACAAGgatGGTAAAATTCAGCCATATAAGAAATCTGAACCTATTCCTGAGGTTAATAACGAGCCTGTTAAAGTGGTTGTTGCTGACAGTCTTCAGGATATTGTTTTCAACTCAGGGAAAAATGTTTTGCTGGAGTTTTATGCTCCCTGGTGTGGACATTGTAAAAAGTTGGCTCCAATATTAGATGAAGTTGCAGTCTCGTTTCAAAATGATGCTGATGTTGTTATTGCCAAACTTGATGCAACTGCGAACGATATTCCAAGCGAGACATTTGATGTACAAGGTTATCCAACATTGTACTTCAGGTCTGCCAGTGGAAAAATATCACAGTATGATGGCAATAGGACCAAGGAGGACATCATAGATTTCATTGAGAAGAACCGGGATAAATCTGAGAAACCTGCTCCCCAAGAAGAACAAACGAAAGACGAGAAAGTAAAAGATGAGCTTTAA 1524 0.4062 MADRVSVCLLFAFVLSLVASLPSQISADEAEGKEFVLTLDHSNFSDTISKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKVDANEEQNRELATEFDVKGFPTIKILRNGGKNVQEYKGPREADGIVEYLKKQSGPASTEIKSADDASAFIGENKVVIVGVFPKFSGEEFENFTALTEKLRSDYDFGHTLDAKHLPRGESSVNGPIVRLFKPFDELFVDFQDFHLDTLEKFVEEASLPIVTVFNSDPSNHPYVIKFFNSPNAKAMLFINFTTEEADSLKSKYREAAEQYRLDGISFLVGDVEASQGAFQYFGLKEDQVPLIIIQHNDGTKFLKPNLEPEHIPAWLKDYKDGKIQPYKKSEPIPEVNNEPVKVVVADSLQDIVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSFQNDADVVIAKLDATANDIPSETFDVQGYPTLYFRSASGKISQYDGNRTKEDIIDFIEKNRDKSEKPAPQEEQTKDEKVKDEL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0383 507 CDD PDI_b_family 148 244 - -
Sto5g0383 507 SUPERFAMILY Thioredoxin-like 36 146 IPR036249 -
Sto5g0383 507 Pfam Thioredoxin 36 142 IPR013766 -
Sto5g0383 507 Pfam Thioredoxin 380 483 IPR013766 -
Sto5g0383 507 PRINTS Thioredoxin family signature 54 62 - -
Sto5g0383 507 PRINTS Thioredoxin family signature 62 71 - -
Sto5g0383 507 PRINTS Thioredoxin family signature 107 118 - -
Sto5g0383 507 Gene3D Glutaredoxin 145 248 - -
Sto5g0383 507 PANTHER PROTEIN DISULFIDE-ISOMERASE 7 500 - -
Sto5g0383 507 Pfam Thioredoxin-like domain 172 357 - -
Sto5g0383 507 ProSiteProfiles Thioredoxin domain profile. 15 145 IPR013766 -
Sto5g0383 507 SUPERFAMILY Thioredoxin-like 246 377 IPR036249 -
Sto5g0383 507 ProSiteProfiles Thioredoxin domain profile. 358 486 IPR013766 -
Sto5g0383 507 MobiDBLite consensus disorder prediction 482 507 - -
Sto5g0383 507 CDD PDI_a_family 37 140 - -
Sto5g0383 507 Gene3D Glutaredoxin 367 505 - -
Sto5g0383 507 Coils Coil 278 298 - -
Sto5g0383 507 PANTHER PROTEIN DISULFIDE ISOMERASE 7 500 - -
Sto5g0383 507 ProSitePatterns Thioredoxin family active site. 400 418 IPR017937 -
Sto5g0383 507 CDD PDI_b'_family 262 359 - -
Sto5g0383 507 SUPERFAMILY Thioredoxin-like 346 487 IPR036249 -
Sto5g0383 507 ProSitePatterns Thioredoxin family active site. 55 73 IPR017937 -
Sto5g0383 507 SUPERFAMILY Thioredoxin-like 149 248 IPR036249 -
Sto5g0383 507 TIGRFAM ER_PDI_fam: protein disulfide isomerase 36 507 IPR005792 GO:0003756
Sto5g0383 507 CDD PDI_a_PDI_a'_C 379 481 - -
Sto5g0383 507 TIGRFAM pdi_dom: protein disulfide-isomerase domain 384 484 IPR005788 GO:0003756
Sto5g0383 507 TIGRFAM pdi_dom: protein disulfide-isomerase domain 40 143 IPR005788 GO:0003756
Sto5g0383 507 Gene3D Glutaredoxin 23 144 - -
Sto5g0383 507 Gene3D Glutaredoxin 249 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0383 Sto-Chr5 2381259 2385485 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0383 K09580 - gmx:100170705 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0383 5 2381259 2385485 Sto5g0383 5 2381259 2385485 ECH