Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0379 ATGGACGTGAAAAGCAGAGGAATCGCAAtggctttcttcttctttctgggATTTTCTgctattttctctttctctttctcatctGCCAATCAACCTCGTATTACCATAAAGCCAACTCCGAATTATCGCCCCGGCACCTCCGTTGTTTTCCAGGTTCAAGGGAATGTATACCCTCTCGGGTATTACTCAGTGTCCCTTAACATTGGGAATCCCCCTAAAGCTTTTGACCTTGACATTGACTCCGGCAGTGACCTGACGTGGGTACAGTGTGATGCACCGTGTAAAGGTTGCACCAAGCCTCGGGATAAGCAATACAAACCGAAGAAGGAGAACATTGTGAAGTGTGTGGACCCGTTGTGTGCAGGAGTGCAATCATCAGGGAGGCATGATTGTGGTTCCCCAAACGAGCAATGCGATTACGAGGTTGAGTATGCAGACGATGGTTCGTCTCTGGGTGTGCTGGTGCGAGACTATATTCCGCTTGGCTTCGTCAATGGCTCCACCCTACGTGAAAGGGTGGGGTTTGGGTGTGGGTATGATCAAAAGTATTCAGATGCACCATCAACCGCAGGAGTGTTGGGCCTTGGGAACGGGAAGGCAAGCTTTGTGTCACAGCTTAGTTCAATGGGTGTGATTCGTAATGTTGTGGGCCATTGCTTCAGTGCCCGTGGGGGAGGCTTTTTGTTTTTTGGAGATCATCTCCTTCCCTCCTCTGGAGTTTCTTGGATGCCAATTTTGACTGCGTCTTCTGCAAAACACTACATGACGGGACCAGTGGATGTGGTTTTCAATGGAAAAGCTACAAGTGTGAAGGATCTTCAAGTTATCTTCGACAGTGGGAGCTCCTACTCGTACTTCAATTCACAAGCTTACCAAGCCATTGTTAATACGATAGTCAATGATTTAAAGGGAAAGCAATTGAGTAGAGCAACTGCAGATCGTTCCCTTCCACTTTGCTGGAAGGGCGCAAAGCCTTTCAAGTCTTTAAGTGACGTCACCATCTATTTTAAGCCCTTAACACTGAGCTTCACAAGGACTAGGAATTTGCAGCTTCAACTGCCACCACCCGCTTATCTCATTCTCACCAAATATGGCAATGTCTGCTTGGGAATTCTGAACGGCGCTGAAGCTGGACTAGGAAATCTCAACATAATTGGAGATATCTTTTTACAAGATAAAATGGTGATTTATGACAACGAGAAAAAGCAGATTGGATGGGTTTCGGCCAATTGCGATAGGGTTCCCAAGTAA 1251 0.45 MDVKSRGIAMAFFFFLGFSAIFSFSFSSANQPRITIKPTPNYRPGTSVVFQVQGNVYPLGYYSVSLNIGNPPKAFDLDIDSGSDLTWVQCDAPCKGCTKPRDKQYKPKKENIVKCVDPLCAGVQSSGRHDCGSPNEQCDYEVEYADDGSSLGVLVRDYIPLGFVNGSTLRERVGFGCGYDQKYSDAPSTAGVLGLGNGKASFVSQLSSMGVIRNVVGHCFSARGGGFLFFGDHLLPSSGVSWMPILTASSAKHYMTGPVDVVFNGKATSVKDLQVIFDSGSSYSYFNSQAYQAIVNTIVNDLKGKQLSRATADRSLPLCWKGAKPFKSLSDVTIYFKPLTLSFTRTRNLQLQLPPPAYLILTKYGNVCLGILNGAEAGLGNLNIIGDIFLQDKMVIYDNEKKQIGWVSANCDRVPK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0379 416 SUPERFAMILY Acid proteases 54 414 IPR021109 -
Sto5g0379 416 Pfam Xylanase inhibitor N-terminal 62 232 IPR032861 -
Sto5g0379 416 Gene3D Acid Proteases 234 414 IPR021109 -
Sto5g0379 416 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 275 286 IPR001969 GO:0004190|GO:0006508
Sto5g0379 416 Pfam Xylanase inhibitor C-terminal 271 406 IPR032799 -
Sto5g0379 416 Gene3D Acid Proteases 40 232 IPR021109 -
Sto5g0379 416 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 77 88 IPR001969 GO:0004190|GO:0006508
Sto5g0379 416 ProSiteProfiles Peptidase family A1 domain profile. 62 407 IPR033121 -
Sto5g0379 416 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 2 414 - -
Sto5g0379 416 PRINTS Pepsin (A1) aspartic protease family signature 68 88 IPR001461 GO:0004190|GO:0006508
Sto5g0379 416 PRINTS Pepsin (A1) aspartic protease family signature 275 286 IPR001461 GO:0004190|GO:0006508
Sto5g0379 416 PRINTS Pepsin (A1) aspartic protease family signature 383 398 IPR001461 GO:0004190|GO:0006508
Sto5g0379 416 PANTHER ASPARTYL PROTEASES 2 414 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0379 Sto-Chr5 2349204 2351264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0379 46 416 Miscellaneous Gene Families AT1G44130 60.267 2.38e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0379 - - aprc:113846122 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0379 5 2349204 2351264 Sto5g0379 5 2349204 2351264 ECH