Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0376 ATGCACTCAGTATCACTGAGAGGGATTGAGGTGATGAAGAGAAGAAGATCCACCTCATCTTCATCGCTCTCTCCCTCCTCCAATTCCAACTTGTCCTCACTTCCTCCCACTCATTCAAAGCCCATCTCCATCTCCGCTTGCTATCCCTCCAAAAAACCTAAATCCATCGTCGCTTCTCTCAAAGCATCTTCCCAATTCGATACTGTGAACTGGGCCCCACTTAATCTTCCTCAGGAAGAGCTCTTCTTGCCTCTCACTTTTCCCACCGGCCAAACCTTCCGGTGGAAAAGGACCGGACCTTTGCAGTACACGGGCGTTGTTGCCTCTCACCTTGTATCTCTCAAGCACGTTGAAAACGGCGACGTTTCTTACTGCCTTCACAACGCTGACTCCGCGAATGATGCCGCCACGACGGCTTTGCTCGACTTTCTCAATGCTAGTGTGTCTCTCACTGACATTTGGAAGGCGTTCTCTGCTTCAGATGCCAGGTTCGCCGAGTTGGCGCGCCATTTGTGTGGTGCCCGAGTGCTTAGGCAAGATCCATTGGAGTGTTTGATTCAGTTTTTGTGTTCTTCCAATAACAACATTCAGAGAATTACCAAAATGGTGGATTATATTTCATCTTTGGGGAATTACTTAGGGACAGTTGGAGGTTTTAAATTCCACGCTTTCCCCACTATGGAGCAGCTGTCATTGATTTCAGAGGAGGAGCTTAGAAAGGCTGGTTTTGGTTACAGGGCCAAATATATAGTTGGCACAGTAAATGCTTTGCAATCAAAACCCGATGGAGGGGAAGACTGGCTTAAATCTCTTCGTGTGTTGGATCTTCAAGAAGTTATAGATGCCCTCTGTACATTACCTGGTGTGGGTCCAAAGGTGGCTGCTTGCATATCTCTTTTTTCACTTGATCAACATCATGCCATTCCTGTTGACACACATGTGTGGCGGATTGCCACCAAGTACCTCTTACCTGAGCTTGCAGGTTCCCGTTTAACACCAAAGCTTAGCAGTCGTGTTGCAGAGGCATTTGTAAGCAGATATGGTAAATATGCTGGCTGGGCTCAAACTCTTATGTTCATAGCTGAATTACCTGCACAAAAGGTCCTCCTACCTTCACAATTACGGACTATCAAACAGCGCAAGCATACAATGGAAGAACACAGTGAAATAGAAGTGGAATTGAAAAAACATCGAGTGCAGTACTAA 1206 0.4643 MHSVSLRGIEVMKRRRSTSSSSLSPSSNSNLSSLPPTHSKPISISACYPSKKPKSIVASLKASSQFDTVNWAPLNLPQEELFLPLTFPTGQTFRWKRTGPLQYTGVVASHLVSLKHVENGDVSYCLHNADSANDAATTALLDFLNASVSLTDIWKAFSASDARFAELARHLCGARVLRQDPLECLIQFLCSSNNNIQRITKMVDYISSLGNYLGTVGGFKFHAFPTMEQLSLISEEELRKAGFGYRAKYIVGTVNALQSKPDGGEDWLKSLRVLDLQEVIDALCTLPGVGPKVAACISLFSLDQHHAIPVDTHVWRIATKYLLPELAGSRLTPKLSSRVAEAFVSRYGKYAGWAQTLMFIAELPAQKVLLPSQLRTIKQRKHTMEEHSEIEVELKKHRVQY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0376 401 MobiDBLite consensus disorder prediction 15 38 - -
Sto5g0376 401 Gene3D - 61 144 - -
Sto5g0376 401 SUPERFAMILY DNA-glycosylase 180 360 IPR011257 GO:0003824|GO:0006281
Sto5g0376 401 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 74 185 IPR012904 GO:0003684|GO:0006289|GO:0008534
Sto5g0376 401 Pfam HhH-GPD superfamily base excision DNA repair protein 186 321 IPR003265 GO:0006284
Sto5g0376 401 PANTHER N-GLYCOSYLASE/DNA LYASE 70 381 - -
Sto5g0376 401 MobiDBLite consensus disorder prediction 1 38 - -
Sto5g0376 401 CDD ENDO3c 183 360 IPR003265 GO:0006284
Sto5g0376 401 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 70 381 - -
Sto5g0376 401 SMART endo3end 190 363 IPR003265 GO:0006284
Sto5g0376 401 Gene3D Hypothetical protein; domain 2 180 304 - -
Sto5g0376 401 Gene3D - 153 363 IPR023170 -
Sto5g0376 401 SUPERFAMILY TATA-box binding protein-like 69 179 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0376 K03660 - gmx:100789749 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0376 5 2333829 2340605 Sto5g0376 5 2333829 2340605 ECH