Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0351 ATGAAAGTGACATGGAAGAACAACAAGAAACGCTCCTTGACGGCGGTGTCCAACTTCAGTAATCTGCCTTTCGAGCATGAAGAGGAGAAGGTTTCTCGCGAAGGAGAAGCTCATACACCGTCCAATAAAGATGCTGAAATCGTTGCTCAAAACTCTGAGCAATCCAAAGAACTAGATGGTTCCCCTCACTCCCACTTATCCCACGCAAGACGTCTAGCCAAAGAATTTCAAGCCCAGGGAGACAAGCTTGCCGAGGAGGGGAAATACCGGGAAGCATTAGGCAAATGGGAATCTGCTCTTACTTTGACCCCTGAAGTTGCAATTTTACATGAACAGAAGGCCCAAGTTCTACTAGAAATTGGAGATGCTTGGAGTGCATTAAAAGCTGCAACGCGAGCTACAGAATTGGAGCCGTCATGGGCTGAGGCATGGGTCACACTTGGGAGGGCACAGTTAAATTTTGGTGAGCCTGATAGCGCTATTGAGAGTTTTGACAGAGCCCTTTCTATCAAGCCTGATAGCGAGGAAGGCCGTGAAGACAGGAAAACTGCATTACATCTTGTAAAGAAGAGAAAGCAGCTGCACTCATCTGGATTGAGTACTACTACAAATCGTTATGCGGTGGGTGATAAGGATGGGAGCACCTGA 648 0.4722 MKVTWKNNKKRSLTAVSNFSNLPFEHEEEKVSREGEAHTPSNKDAEIVAQNSEQSKELDGSPHSHLSHARRLAKEFQAQGDKLAEEGKYREALGKWESALTLTPEVAILHEQKAQVLLEIGDAWSALKAATRATELEPSWAEAWVTLGRAQLNFGEPDSAIESFDRALSIKPDSEEGREDRKTALHLVKKRKQLHSSGLSTTTNRYAVGDKDGST 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0351 215 MobiDBLite consensus disorder prediction 23 41 - -
Sto5g0351 215 MobiDBLite consensus disorder prediction 16 69 - -
Sto5g0351 215 ProSiteProfiles TPR repeat region circular profile. 141 173 - -
Sto5g0351 215 Gene3D Tetratricopeptide repeat domain 65 204 IPR011990 GO:0005515
Sto5g0351 215 ProSiteProfiles TPR repeat profile. 73 106 IPR019734 GO:0005515
Sto5g0351 215 SUPERFAMILY TPR-like 72 192 IPR011990 GO:0005515
Sto5g0351 215 MobiDBLite consensus disorder prediction 194 215 - -
Sto5g0351 215 ProSiteProfiles TPR repeat profile. 141 174 IPR019734 GO:0005515
Sto5g0351 215 SMART tpr_5 141 174 IPR019734 GO:0005515
Sto5g0351 215 SMART tpr_5 73 106 IPR019734 GO:0005515
Sto5g0351 215 SMART tpr_5 107 140 IPR019734 GO:0005515
Sto5g0351 215 MobiDBLite consensus disorder prediction 191 215 - -
Sto5g0351 215 Pfam Tetratricopeptide repeat 113 174 - -
Sto5g0351 215 PANTHER OSMOSIS RESPONSIVE FACTOR 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0351 Sto-Chr5 2118878 2123050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0351 85 209 Glycosyltransferase AT3G04240 25.000 2.22e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0351 - - jre:109014070 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0351 5 2118878 2123050 Sto5g0351 5 2118878 2123050 ECH