Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0346 ATGAAGGAGCTAGGGCTGAAGGTGATGGAAGTGATTGGAATAAGCTTAGGAGTGGATAGGATGCATTACAGGGAGTTCTTCGAGGACGGATGTTCCATAATGAGATGCAACTATTATCCAAGTTGCCAACACCCAGAGGATGCGCTTGGGACTGGGCCCCACTGTGACCCCACCTCTCTCACCATTCTTCATCAGGATCAAGTTGGAGGCCTCCAAGTTCTCACCAACAACAAGTGGCACTGTGTTCCCCCTCGTCCCAATGCCTTTGTTGTCAACATTGGAGACACCTTCACGGCATTATCAAACGGGAAATACAAGAGCTGCGTGCACAGGGCAGTGGTGAATGAGAGGAAGGAGAGGAGGTCACTGGCATTCTTTCTGTGCCCAAAAGAAGACAAAGTGGTGAGAGCACCGGAGGATATGATTGTAAGAGATGGCACAAAGCACTACCCAGATTTCACATGGTCCGATCTCCTTCTCTTCACTCAGAACTACTACAGAGCCGACCATGCTACTCTTCACAATTTCACCAACTGGATTCTATCCTCTCCTACTACTTAA 561 0.4866 MKELGLKVMEVIGISLGVDRMHYREFFEDGCSIMRCNYYPSCQHPEDALGTGPHCDPTSLTILHQDQVGGLQVLTNNKWHCVPPRPNAFVVNIGDTFTALSNGKYKSCVHRAVVNERKERRSLAFFLCPKEDKVVRAPEDMIVRDGTKHYPDFTWSDLLLFTQNYYRADHATLHNFTNWILSSPTT 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0346 186 PANTHER GIBBERELLIN 20-OXIDASE 1 182 - -
Sto5g0346 186 SUPERFAMILY Clavaminate synthase-like 1 168 - -
Sto5g0346 186 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 182 - -
Sto5g0346 186 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 29 129 IPR005123 -
Sto5g0346 186 Gene3D - 1 160 IPR027443 -
Sto5g0346 186 Pfam 2OG-Fe(II) oxygenase superfamily 32 129 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0346 Sto-Chr5 2084740 2085300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0346 4 179 Glycosyltransferase AT5G59530 30.899 1.33e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0346 K05282 - gmx:100801187 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0346 5 2084740 2085300 Sto5g0346 5 2084740 2085300 ECH