Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0340 ATGGCGATCTGGTTATTGGCAAGGTCCAGAACCATAATTCAACGCCTTCCTAAAATGATGCCTTGTTTTGGAGTTCTATATCATTCTTCTTCATCCTTTCACTACTCTGCTTCGCCTTCCTCATCATTCCTAATGTCACACGGCCCTCGCCGTCTAACCTCCGGTACtactcctttcttcttcttcttctcgcgtCCTGAATCTACCAAGGCTCACACACAACTTGAACAACTCTATACCAGTGAGGATGATGACGATCagGCCATTGATTTTCCTGGTGGGAAAGttgcatatacttgtgaaaTGAGGTTCATTTCTGAAAGTGCTGAGAAGCGGGTACCTTGTTATCGAGTTCTTGATGACAACGGAGAGCTCGTGTCACACAGCAACCATGTACAGGTGAGCAAAGAAATGGGTGTAAAGATGTACACAAACATGGTGACCCTTCAAATCATGGACAGCGTATTCTACGAATTGCAGAGGCAAGGAAGAATCTCCTTCTACGTCACCTCAATGGGAGAAGAAGCAGTTAACATTGCATCTGCAGCTGCACTTTCCGCTCATGACGTTATATTGCCTCAGTACCGGGAGCCGGGAGTTCTATTGTGGCGCGGATTTACACTTGAAGACTTTGCCAACCAGTTGATGGGAAACAAGGCTGATTTTGGAAAAGGCAGGCAGATGCCTATACACTATGGATCTAACAGCCTTAATTACTTCACTGTCTCATCACCCATTGCAACACAGCTTCCTCAAGCTGCGGGCGTTGCCTATTCCCTTAAAATGGACGCCAAAAATGCTTGCGCAGTCACTTATTTCGGGGATGGAAGCACTAGTGAGgGAGATTTCCATGCAGCTCTCAATTTTGCAGCAGTAATGGAGGCCCCTGTTATTTTCTTCTGTCGCAACAATGGATGGGCCATCAGTACCCCCGTACAAGAACAATTTCGAAGTGATGGTATTGTAGTTAAAGGTCAAGGCTATGGAATCAGGGGTATCCGAGTAGATGGAAATGATGCACTTGCTGTTTATAGTGCAGTTCATACAGCTCGTGAAATGGCTATAACTGAAAGCAGACCCATTTTAATTGAGGCACTTACGTATAGAGCAGGACACCACTCCACATCAGATGACTCAACCAAGTATAGGCCGATCCATGAGATTGAGTATTGGAAAATGACACGAAACCCAGTAAATAGATTCAAGAAATGGGTAGAAAAGAATGGTTGGTGGGAGGACAAGGATGAAGTGGAGCTTCGAAGCAGTGTGAAGAAGCAGTTATTGGAAGCCATTCGGGTAGCAGAGAAAACAGAAAAACCTTCAGTTGAGGAGATTTTCAATGATGTGTATGACCAACTGCCATCAAATCTTGAGGAGCAAGAGAGACTACTCAGACAAGCCATCCACAACCATCCCGAAGACTATCCTTCTGACGTTCCTTCACGGCGACATTTCCCGCCCATTTCTGTTCCCGAAGAATATGCTGAGGATATTTTCTCGGTTTCATCTAATTGTTCTCCATCGGCCAATGGATGGCGAGAGAGAGATTCATATTGA 1557 0.4393 MAIWLLARSRTIIQRLPKMMPCFGVLYHSSSSFHYSASPSSSFLMSHGPRRLTSGTTPFFFFFSRPESTKAHTQLEQLYTSEDDDDQAIDFPGGKVAYTCEMRFISESAEKRVPCYRVLDDNGELVSHSNHVQVSKEMGVKMYTNMVTLQIMDSVFYELQRQGRISFYVTSMGEEAVNIASAAALSAHDVILPQYREPGVLLWRGFTLEDFANQLMGNKADFGKGRQMPIHYGSNSLNYFTVSSPIATQLPQAAGVAYSLKMDAKNACAVTYFGDGSTSEGDFHAALNFAAVMEAPVIFFCRNNGWAISTPVQEQFRSDGIVVKGQGYGIRGIRVDGNDALAVYSAVHTAREMAITESRPILIEALTYRAGHHSTSDDSTKYRPIHEIEYWKMTRNPVNRFKKWVEKNGWWEDKDEVELRSSVKKQLLEAIRVAEKTEKPSVEEIFNDVYDQLPSNLEEQERLLRQAIHNHPEDYPSDVPSRRHFPPISVPEEYAEDIFSVSSNCSPSANGWRERDSY 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0340 518 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 65 480 - -
Sto5g0340 518 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 113 476 IPR029061 -
Sto5g0340 518 Pfam Dehydrogenase E1 component 145 442 IPR001017 GO:0016624
Sto5g0340 518 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 65 480 - -
Sto5g0340 518 CDD TPP_E1_PDC_ADC_BCADC 142 434 - -
Sto5g0340 518 Gene3D - 84 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0340 Sto-Chr5 2034469 2039142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0340 1 318 Acyl Lipid Metabolism Gene Families AT1G21400 62.733 1.28e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0340 K00166 - gmx:100796766 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0340 5 2034469 2039142 Sto5g0340 5 2034469 2039142 ECH