Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0338 ATGGCTACAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAACAGAATCAATCCTCCAAGGGTCTCTGTGGACAATGCTAGTTGCCATGATTGTACTCTAGTCAAGgTTGATAGTGTTAATAAACCAGGAATTCTGCTAGAGGTTGTACAAATTCTAACTGACCTTGACTTCATAATCACCAAGGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGCAGTATTTCATGTCACGGATCAGCAGGGAAAGAAGATAACAGACAGCAAAACCATTGATTTCATAGAGAAGGCTCTAGGACCCAAGGGCCAGAGCAATGAGGGGGTGAAGAGGTGGGGAGGCAAAGGGGTTGGTGTGCACTGTGTTGGTGATCATACAGCCATTGAGCTGATTGGCAGAGACCGGCCAGGTCTCTTGTCTGAGATCTCGGCTGTGCTGGCCAGCCTCCATATTAATGTGACTGCAGCTGAAGTTTGGACTCACAATAGGCGAATAGCATGTGTTCTTTATGTGAATGATGCTACTAGCCAATCTGTGGATAGTCCAAACAGATTATCTCTGATGGAGGAGCAACTAAAGAATATCCTACGTGGGTGTGAGGATGATGATAAAGTGGGGCGCACGAGTTTGTCCATGGGTTTCACCCATATGGATCGGCGGCTCCACCAAATGCTGTTTGCTGATCGAGATTATGAATGTGCCGTGGTAACAACAGACGTTGACTATGCTCCCTCTTTCAAGCCACAGATCACAATAGAGCGTTGTGAGGAGAAAGGGTACTCAGTGGTGAGTGTGAGGTGCAAAGATCGAGCCAAACTCATGTTCGACATTGTTTGCACTCTCACTGACATGCAATATGTTGTTTTCCACGCCACAATTTCATCAGATGCTCCATATGCATCGCagGAGTACTTTATTCGGCACGTGGACGGATGCACGCTTGATACtgaaggagagaaagagagggtcATTAAATGTATTGAAGCTGCTATTCAAAGAAGAGTAAGCGAGGGTGTAAGCCTTGAGCTGTGTGCAAAGGACAGAGTGGGTTTGCTGTCAGAAGTAACAAGGATTCTGAGAGAGAATGGGTTGACAGTATGTAGAGCAGGCGTATCTACGGTAGGGGAGGAAGCAGTGAATGTGTTCTATGTGAGAGATGCTTCTGGGAACCCAGTGGACAGCAAGACCATTGAAGCACTTCGGAAAGAGATTGGGAAAACAATGATGATCAATGTCAAGAAGGTACCTGGGAATGCCAAAGCACCTGAGAACCGAGGATGGGCTAAAACAAGCTTCTCCTTTGGGAATTTGTTTGAAAGGTTCTTGACTTGA 1344 0.4487 MATVCWPYFDPEYENFSNRINPPRVSVDNASCHDCTLVKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDAVFHVTDQQGKKITDSKTIDFIEKALGPKGQSNEGVKRWGGKGVGVHCVGDHTAIELIGRDRPGLLSEISAVLASLHINVTAAEVWTHNRRIACVLYVNDATSQSVDSPNRLSLMEEQLKNILRGCEDDDKVGRTSLSMGFTHMDRRLHQMLFADRDYECAVVTTDVDYAPSFKPQITIERCEEKGYSVVSVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPYASQEYFIRHVDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTVGEEAVNVFYVRDASGNPVDSKTIEALRKEIGKTMMINVKKVPGNAKAPENRGWAKTSFSFGNLFERFLT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0338 447 CDD ACT_ACR_1 35 107 - -
Sto5g0338 447 ProSiteProfiles ACT domain profile. 131 214 IPR002912 -
Sto5g0338 447 ProSiteProfiles ACT domain profile. 344 424 IPR002912 -
Sto5g0338 447 Pfam ACT domain 344 407 IPR002912 -
Sto5g0338 447 Pfam ACT domain 131 200 IPR002912 -
Sto5g0338 447 SUPERFAMILY ACT-like 127 201 IPR045865 -
Sto5g0338 447 SUPERFAMILY ACT-like 340 410 IPR045865 -
Sto5g0338 447 CDD ACT_ACR_4 342 413 - -
Sto5g0338 447 ProSiteProfiles ACT domain profile. 37 115 IPR002912 -
Sto5g0338 447 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 447 - -
Sto5g0338 447 SUPERFAMILY ACT-like 32 106 IPR045865 -
Sto5g0338 447 CDD ACT_ACR_3 264 338 - -
Sto5g0338 447 Gene3D - 129 202 - -
Sto5g0338 447 Gene3D - 339 419 - -
Sto5g0338 447 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 447 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0338 Sto-Chr5 2022007 2025335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0338 - - adu:107460610 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0338 5 2022007 2025335 Sto5g0338 5 2022007 2025335 ECH