Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0336 ATGGTTATGGAAACTGAGTATTATGATATTCTTGGGGTTACTCCCTCCGCTTCCCAGGTGGAAATTCGAAAGGCTTATTACCAGAAGGCAATGCAAGTTCATCCGGATAAAAACCCAAATGATCCTCGGGCCGCACAAAAATTTCAGGTCTTGGGTGAAGCTTATCAGATTTTAAGTGATCCAGTGCAGAGAAATGCGTACAATCAAAATGGAAAACATTCCGTTTCTAGAGAAACTATGCTAGACCCCATGGCTGTCTTTTCCTTGCTCTTTGGAAGTGAATTATTTGAGGACTATGTAGGGCATCTAACTGTCGCATCAATGACTTCGTCTGAAATGGCTGATGAAAGTGAAGATCCGGATAAACTAAATGAAAAGTTGAAGGCAAGTATGTTTTACAATTCAGTccaaaaagaaagggaagaaaagTTAACAaggtttttaaaagattttcttGGTCAATATGTCCACGGTGATAAAAAGGGGTTCTTCCAGCGAGCGGAATCTGAAGTCAGAAGGCTTTCTAATGCAGATTTTGGAGTTGATATGTTACATACCATCGGCTATATTTATTCAAGACAGGCAGCACTAGAACTAGGGAAAAAAGCCATTTATCTTGGAGTACCATTTCTGGCTGAGTGGGTTCGACATAAAGGACATTTCTGGAAATCACAGTTCACGGCAGCTAAAGGTGCTTTCCATTTACTGCAGCTACAAGAAGACATTCGCAAGCAATTTAAAATGGACGGTAGCGGCCCTGAAAATGATTTTGAATCTCATATTCGCCTTAATAAGGATGCACTGATGAATTCTTTATGGAAGTTGAATGTAGTGGACATAGAAGTAACCTTAGTACATGTCTGTCAAATGGTCCTAAGGGAAAATAACGTTAAGAAAGAAGAACTTAAAGCCCGTGCGGAGGCTCTCAAAATTCTTGGGAAGTTATTTCAggaaaaaaattcaaaaggaGGAGCTACATGGAAGAATAAAGTTGCTGCTGATTCTGACGACGAAGGAAGCAGTGCAGATTCTTCTGAGGATGATGAATCACCAAGCAGAGGCTGCAGAGTACTTTCCTACCGAACGCCCTTTTTCACTCAGGGTATAGGCAGGCTCTTCAAATGCCTCTGTAATCCAGCATTTGATGTGGATGATGAAGAGATAGTTTACAGGAGCAAATGA 1182 0.3917 MVMETEYYDILGVTPSASQVEIRKAYYQKAMQVHPDKNPNDPRAAQKFQVLGEAYQILSDPVQRNAYNQNGKHSVSRETMLDPMAVFSLLFGSELFEDYVGHLTVASMTSSEMADESEDPDKLNEKLKASMFYNSVQKEREEKLTRFLKDFLGQYVHGDKKGFFQRAESEVRRLSNADFGVDMLHTIGYIYSRQAALELGKKAIYLGVPFLAEWVRHKGHFWKSQFTAAKGAFHLLQLQEDIRKQFKMDGSGPENDFESHIRLNKDALMNSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELKARAEALKILGKLFQEKNSKGGATWKNKVAADSDDEGSSADSSEDDESPSRGCRVLSYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYRSK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0336 393 CDD DnaJ 6 60 IPR001623 -
Sto5g0336 393 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 377 - -
Sto5g0336 393 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Sto5g0336 393 PRINTS DnaJ domain signature 8 26 IPR001623 -
Sto5g0336 393 PRINTS DnaJ domain signature 26 41 IPR001623 -
Sto5g0336 393 PRINTS DnaJ domain signature 43 63 IPR001623 -
Sto5g0336 393 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Sto5g0336 393 SMART dnaj_3 5 63 IPR001623 -
Sto5g0336 393 MobiDBLite consensus disorder prediction 327 353 - -
Sto5g0336 393 Gene3D DnaJ domain 2 85 IPR036869 -
Sto5g0336 393 Pfam DnaJ domain 6 68 IPR001623 -
Sto5g0336 393 Pfam X-domain of DnaJ-containing 137 321 IPR026894 -
Sto5g0336 393 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 377 - -
Sto5g0336 393 SUPERFAMILY Chaperone J-domain 5 101 IPR036869 -
Sto5g0336 393 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0336 Sto-Chr5 2008159 2011432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0336 7 81 Miscellaneous Gene Families AT1G16680 38.462 8.31e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0336 - - gmx:100793811 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0336 5 2008159 2011432 Sto5g0336 5 2008159 2011432 ECH