Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0323 ATGATAAGAGCACAAGATTTGTACAACGTGATGTGTGGGATGGTTCCTCTATACTTTGCAATGCTGTTGGCGTACGGTTCCGTAAAATGGTGCAAGATATTGACAGCCGAGCAGTGCTCCGGCATCAACCGCTTCGTGGCGGTTTTCGCGGTGCCGGTCCTCTCCTTCCACTTCATCTCCCAAAACAACCCCTACCAAATGGACTCCAAATTCATCATCGCCGACACAATCTCCAAACTGGTggtcctcctcttcctctcccTCTGGGCCATCTTCTTCTCCGCCGCCACCTTGGACTGGCTCATcactctcttctccctctccacTCTCCCCAACACTCTCGTCATGGGCATCCCTCTCCTCCAAGCCATGTACGGTCCCTTCACCCAGTCCCTCATGGTCCAACTTGTCGTCCTTCAATGCATTATATGGTACACTCTCCTGCTGTTCTTGTTTGAATATAGGGCGGCCACTCTTTTGATTCACACCCACTTCCCTGGCCCTACGCCTGCCTCTATAACACAATTTGAGATCGATGGTGACGTCATTTCCCTCGACGGTCGCGATATGCCCCTCCGAACCGAATCCGAAACCGACAACCATGGGAGGATCCGGGTCCGGATCCGACGCTCCACCTCGTCTGCTCCGGAATCCGCATTGTCTTCCTCCATAGGCATCACTCCCAGACCCTCCAACCTCTCCAATGCCGATATCTTCTCCGTCAACACCCCGCTTCACGCGGATGGAGCAGCTCACGATATCGTATTCGGGCATGGAGATCTCGGATTCGGGTACCCGGGCGCCAGCCCTCGGATGTCCGGGTACGCGTCGTCCGATGCATACTCGCTCCAGCCAACGCCGCGGCCCTCCAATTTTAACGAAGTGGAGACGACGGTGTGGGCGAGGTCTCCGGTTGGCGGAGGGAGGATAATGAGGCAGTCGCCGATGGTGAGTGAGTCGGGGGGAGAGAGACAAGGAGGCAAACACATTTGTGGGTCAGTGTCAGAGAAAGAAATCAGCTTTAGAGACAACCTTAACACCAAAATCCCAATGccagaggaagaacaaaaaATGCCACACGCGGTGGTGATGATAAGGCTTATACTGGTGGTAGTAGGAAGGAAActatcccgaaaccctaatacGTATTCTAGTGCGCTAGGACTTCTTTGGTCTCTAATCTCCTTCAAATGGAACGTTGAAATGCCTATTTTGGTAAAATCATCGATCAAAATAATATCGGATGCAGGTCTTGGAATGGCTATGTTCAGCTTAGGTCTATTCATGGCCCTTCAGCCACGGATCATAGCGTGTGGCACAAAAAGAGCAGCAATGGGAATGGGTATTCGCTTCATTGGAGGGCCAATAGTAATGTCTGCGGCCTCCATTGCTATGGGATTGAAAGGACCCAAACTTCATACTGCCATTGTGCAGGCTGCTCTTCCTCAAGGGATAGTACCATTTGTGTTTGCACGCGAATATGGGCTGCACCCAGATATTTTGAGCACTGGGTAA 1515 0.4931 MIRAQDLYNVMCGMVPLYFAMLLAYGSVKWCKILTAEQCSGINRFVAVFAVPVLSFHFISQNNPYQMDSKFIIADTISKLVVLLFLSLWAIFFSAATLDWLITLFSLSTLPNTLVMGIPLLQAMYGPFTQSLMVQLVVLQCIIWYTLLLFLFEYRAATLLIHTHFPGPTPASITQFEIDGDVISLDGRDMPLRTESETDNHGRIRVRIRRSTSSAPESALSSSIGITPRPSNLSNADIFSVNTPLHADGAAHDIVFGHGDLGFGYPGASPRMSGYASSDAYSLQPTPRPSNFNEVETTVWARSPVGGGRIMRQSPMVSESGGERQGGKHICGSVSEKEISFRDNLNTKIPMPEEEQKMPHAVVMIRLILVVVGRKLSRNPNTYSSALGLLWSLISFKWNVEMPILVKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMGIRFIGGPIVMSAASIAMGLKGPKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0323 504 Pfam Membrane transport protein 10 503 IPR004776 GO:0016021|GO:0055085
Sto5g0323 504 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 504 - -
Sto5g0323 504 TIGRFAM 2a69: auxin efflux carrier 1 503 IPR014024 -
Sto5g0323 504 PANTHER AUXIN EFFLUX CARRIER COMPONENT 6 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0323 Sto-Chr5 1925150 1928685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0323 1 503 Organic Solute Cotransporters AT1G77110 65.455 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0323 K13947 - vvi:100250503 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0323 5 1925150 1928685 Sto5g0323 5 1925150 1928685 ECH