Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0319 ATGCAGAGCTACCGCTGCCTCAGTACCCAGTCGCTTGCATGGGCCCCAAGCGGCCGATATCCGAGACACCGCCACCGGCACCTCCAATCACCATGGCGGGTCTCCGCCGTGGCGGCACCTATGAAAAATCAAAAGAAGCACTCAATGCCGGCGGAGAAGATAGAAGTTTTCAAGTCACTGGAAGGGTGGGCTTCGGAAGGGCTTTTGCCGCTGCTGAAGCCTGTGGAGCATTGCTGGCAGCCACAGGACATGGTGCCCGACTCTTCATTGCCGCTGGATGAATTCATGGATCAAGTCAAGGCCTTGCGCCATCGGACGGCGGAGCTTCCAGATGACTACTTCGTGGTTCTCGTGGGTGATATGATCACGGAGGATGCATTGCCTACGTATCAGAGCATGATAAACAATCTGGACGCTGTAGGCGACGAAACTGGAGCAAGCCCCGATCCATGGGCCGTCTGGACCCGTTCTTGGACCGCTGAAGAGAATAGGCACGGGGATCTACTCAGAACCTATCTCTATTTGTCGGGTCGGGTTGATATGCGCATGGTTGAGAAGACCGTACAGTACTTGATTGGAGCCGGCATGGACCCGGGAACAGAAAACAACCCATATCTGGGATTCGTTTACACGTCGTTTCAAGAGCGAGCCACCTTTGTGTCACACGGCAATACGGCTCGTTTAGCGAAAGAAAGGGGTGATCCGGTGCTTGCGCGCATATGTGGGACAATCGCTGCAGACGAGAAGCGGCACGAGAATGCGTACGCTAGGATCGTGGAGAAGCTTCTGGAAGTGGATCCAACGGGCGCGATGCTAGCAATCGCTGATATGATGCAAAAGAGAATAACAATGCCAGCTCATTTAATGTTCGACGGGAGGGACCCACGTCTGTTCGAGCATTTCTCTGCGGTGGCACAACGGCTTGGGGTGTACACGGCGAATGATTACGCAGACATCTTGGAGTTCTTGATCGGACGGTGGAGATTGGAGAAACTGGAGGGGTTGACGAGTGAGGGGAAGCGTGCACAGGAATTTGTATGTGGACTAGCACCCAGGATCAGAAGGTTGCAGGAGAGAGCAGATGAGCGGGCGCGCAAGATGAAGGCCCATACAGCCGTCAAATTCAGCTGGATATTCGACAAACAAGTGTCGCTGAATTGA 1161 0.5418 MQSYRCLSTQSLAWAPSGRYPRHRHRHLQSPWRVSAVAAPMKNQKKHSMPAEKIEVFKSLEGWASEGLLPLLKPVEHCWQPQDMVPDSSLPLDEFMDQVKALRHRTAELPDDYFVVLVGDMITEDALPTYQSMINNLDAVGDETGASPDPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMRMVEKTVQYLIGAGMDPGTENNPYLGFVYTSFQERATFVSHGNTARLAKERGDPVLARICGTIAADEKRHENAYARIVEKLLEVDPTGAMLAIADMMQKRITMPAHLMFDGRDPRLFEHFSAVAQRLGVYTANDYADILEFLIGRWRLEKLEGLTSEGKRAQEFVCGLAPRIRRLQERADERARKMKAHTAVKFSWIFDKQVSLN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0319 386 Gene3D Ribonucleotide Reductase, subunit A 37 385 IPR012348 GO:0016491
Sto5g0319 386 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 33 385 - -
Sto5g0319 386 SUPERFAMILY Ferritin-like 41 384 IPR009078 -
Sto5g0319 386 Pfam Fatty acid desaturase 52 379 IPR005067 GO:0006631|GO:0045300
Sto5g0319 386 ProSitePatterns Fatty acid desaturases family 2 signature. 302 321 IPR005803 GO:0006633|GO:0016491
Sto5g0319 386 PIRSF Dlt9_acylACP_des 6 385 IPR005067 GO:0006631|GO:0045300
Sto5g0319 386 CDD Acyl_ACP_Desat 52 360 IPR005067 GO:0006631|GO:0045300
Sto5g0319 386 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 33 385 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0319 Sto-Chr5 1901243 1902700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0319 29 385 Acyl Lipid Metabolism Gene Families AT1G43800 78.453 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0319 K03921 - gmx:100037478 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0319 5 1901243 1902700 Sto5g0319 5 1901243 1902700 ECH