Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0262 ATGCTTGAAGCAATGGAAAGTTCCGTCAACGGTGCCTTCTCCCACTTGCAGAGCTGTGGAGATAGTAGCGAAGAGGAGCTCTCTGTGCTTCCTCGTCATACCAAAGTGGTGGTCACCGGAAATAACCGTACTAAATCCGTGCTTGTTGGTCTCCAAGGAGTGGTTAAGAAGGCCGTTGGGCTAGGCGGCTGGCATTGGCTGGTCCTTACCAACGGTATAGAAGTGAAGCTACAGAGGAATGCTCTTAGTGTGATTGAAGCACCGACAGGTGATGAGGAAGACGATGAACTTGAATTTGAAAATATGCAGTGGAATGCATCAGATATGGCATCGGACGACACTCAAAAATCCCACAAATCGAGGCACAGGATGCATAGATCATTGGGATCATCGCACAAGACTATGAGCAGGTCCCTCTCTGGTGATTCACAGTCTAAGGGGTCCATCTCAACGCCACAAGGGTCTATGAAGGTTGACTTGAGCAAACTGGAGATGGCTGCATTGTGGAGATATTGGCGACACTTCAATCTTGTGGACTCCGTACCAAACCCATCGAAAGAGCAGCTAGTAGATGTTGTTCAGAGGCATTTCATGTCACAGCAAATGGACGAGTTACAGGTGATTGTGGGATTTGTTAAAGCTGCGAAGAGGCTCAAGACTGTGTGCAAATGA 672 0.4807 MLEAMESSVNGAFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGDEEDDELEFENMQWNASDMASDDTQKSHKSRHRMHRSLGSSHKTMSRSLSGDSQSKGSISTPQGSMKVDLSKLEMAALWRYWRHFNLVDSVPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVKAAKRLKTVCK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0262 223 PANTHER SAP30 1 223 IPR024145 -
Sto5g0262 223 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 163 216 IPR025718 GO:0005515
Sto5g0262 223 Gene3D - 138 223 IPR038291 -
Sto5g0262 223 MobiDBLite consensus disorder prediction 131 154 - -
Sto5g0262 223 MobiDBLite consensus disorder prediction 106 154 - -
Sto5g0262 223 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0262 Sto-Chr5 1536865 1539807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0262 - - gmx:100809195 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0262 5 1536865 1539807 Sto5g0262 5 1536865 1539807 ECH