Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0259 ATGGAGACTGAACTGAAGGATCTGAATTCGAATCCGCCCAAATTCAATAGTTCCGCAGATACTGACCCTGTTCACGATTCCGACCCCACGTCCCACGTCTCTTCCGATCACCTTGAAGACCTTGAAAAGAAATTTGCTGCGTATGTTCGATGCGATGTTTACGGAGTCATGGGACGCGGAGAGTTGCCGACGAAGGAGAAGGTCTTACTTGGGTTGGCATTGGTCACACTGGTTCCGATTAGGGTGGTTTTTGGCATGGCCATATTGGTATTCTATTACTTGATTTGTAAGATTTGTACGCTATGCTACGCTCCAAATCGGGAAGAAGAACAGGAAGACTACGCGCACATGTCTGGGTGGAGGAGGGCCGTGATTGTTCAGTCTGGGAGAACTGTCTCCCGGATGATGCTTTTTGTTCTAGGGTTTTATTGGATCAGAGAGACCTCCCGGTCCTCGAATACAGATGACAAGTCTACCTCAAGATTTTCtgttctattatatattttggttCTGACTATTTCATCCTTTTTCTTTCAATGTGAGAAGGAAGGCAAACATCAGTCTGAAGAGATGGGACCACCTGGTGTAATAATATCTAATCATGTGTCGTACTTGGATATTTTGTATCACATGTCTTCTTCCTTCCCAAGTTTTGTTGCTAAGAGATCAGTGGCTAAACTTCCTCTAGTTGGTCTTATAAGCAAGTGCCTTGGTTGTGTCTATGTTCAGCGGGAATCAAAATCATCAGACTTCAAGGGTGTTTCAGGTGTTGTCACTGATAGAATTCGAGAAGCTCATCAGAATAAGTCTGCTCCAATAATGATGCTGTTTCCAGAAGGTACAACCACAAATGGGGACTTTCTCCTTCCATTCAAGACTGGTGGTTTTTTGGCACGTGCACCTGTACTTCCTGTAATCTTAAGATACCCTTACCAGAGATTTAGTCCTGCCTGGGATTCCATATCTGGGgTACGCCATGTGATTTTGCTTCTCTGTCAATTTGTAAATTATATGGAGGTGACTCGGTTACCTGTATACTACCCTTCACAGCAAGAGAAGGATGACCCCAAACTATATGCTAATAATGTTAGAAGGTTGATGGCTAGTGAGGGTAACTTGATACTTTCTGATATTGGGCTAGCTGAAAAGCGAATATATCATGCTGCTCTCAATGGTAATAATAGCCTGCCTAGTGTTATGCATCAGAAAGACGATTGA 1218 0.4294 METELKDLNSNPPKFNSSADTDPVHDSDPTSHVSSDHLEDLEKKFAAYVRCDVYGVMGRGELPTKEKVLLGLALVTLVPIRVVFGMAILVFYYLICKICTLCYAPNREEEQEDYAHMSGWRRAVIVQSGRTVSRMMLFVLGFYWIRETSRSSNTDDKSTSRFSVLLYILVLTISSFFFQCEKEGKHQSEEMGPPGVIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSGVVTDRIREAHQNKSAPIMMLFPEGTTTNGDFLLPFKTGGFLARAPVLPVILRYPYQRFSPAWDSISGVRHVILLLCQFVNYMEVTRLPVYYPSQQEKDDPKLYANNVRRLMASEGNLILSDIGLAEKRIYHAALNGNNSLPSVMHQKDD 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0259 405 CDD LPLAT_LPCAT1-like 134 384 IPR045252 GO:0008374
Sto5g0259 405 SMART plsc_2 195 310 IPR002123 GO:0016746
Sto5g0259 405 MobiDBLite consensus disorder prediction 1 36 - -
Sto5g0259 405 Pfam Acyltransferase 184 298 IPR002123 GO:0016746
Sto5g0259 405 MobiDBLite consensus disorder prediction 9 24 - -
Sto5g0259 405 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 176 377 - -
Sto5g0259 405 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 23 405 - -
Sto5g0259 405 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 23 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0259 Sto-Chr5 1511206 1516192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0259 1 392 Acyl Lipid Metabolism Gene Families AT1G80950 61.634 4.95e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0259 K13510 - zju:107420277 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0259 5 1511206 1516192 Sto5g0259 5 1511206 1516192 ECH