Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0256 ATGGCTGGTCGTAGAGACGCGTTGCTCACCAGAGATAAAGGTCAATCTGTTCTCGGATCTAGGATCCTTGTTGCTGTAGTTATAGGTATTCTTCTTGGCTGCATTTTCGCCTTCCTCTCACCTCATGGATTCTTCACCTCCAATCGCCCCTTTCATAATCCTCGAATCGGAGTTGCCGATCTTCAGATTGGATCATCTACATGTGAATCACCGGAACAAGTTAATGCCCTGAAAGCAGATATTCTATCAGTAACACAGAAGAATTCTGAGCTCAAGAAGCAGATCAAAAGTCTAATGGAAAATTTGCGGCTAGCTGAGCAAGGAAAGCATCATGCACAGGAACAGTTTGTGACACTGGGCGAGAAGCACAAGGCTGGGCCATTTGGCACTGTCAAGGGTCTGAGAACTAATCCATCTGTCATTCCTGATGAATCTGTGAATCCCAGGTTGGCAAAAATCTTGGAGGATGTTGCTATTTATAAAGAACTTATAGTTGCACTGGCAAACTCTAACGTGAAAGAGATGTTGGAGGTTTGGTTTACAAACATCAAGAAGGTTGGCATACCTAATTTTTTAGTAGTAGCATTGGATGATAGTACTGAAGAATTCTGTAAATCAAATGATGTCCCAGTCTATAGAAGAGATCCAGATGAAGGTATTGACACAATTGCTAGGACAGGAGGTAACCATGCTGTCTCAGGGCTTAAATTTCGTATTTTAAGAGAATTTCTACAATTGGGTTACAGCGTCCTTCTGTCAGACGTTGATATTGTATATTTGCAGAACCCCTTTGATTATCTCTATCGAGATTCAGATGTAGAGTCTATGTCTGATGGTCACAATAATATGACAGCGTATGGGTTTAATGACGTCTTTGATGAACCTGCAATGGGTTGGGCTCGATATGCTCACACAATGAGAATATGGGTTTATAACTCTGGTTTCTTTTACATAAGGCCGACACTTCCTTCAATTGAGTTGTTGGATCGTGTTGCTCGCCGGCTTTCTCGAGAACCAAAATCATGGGACCAGGCAGTTTTTAATGAAGAGCTCTTCTTCCCTTCACATCCCGGTTATGATGGGCTTCATGCTGCCAAAAGAACTATGGATATGTACCTCTTTATGAACAGTAAGGTTCTCTTTAAGACTGTTAGAAAGGATGCTAAACTTAAAAAGTTGAAGCCGGTGATTGTACATGTTAACTATCATCCTGATAAATTCGCTAGAATGAAGGCAGTAGTGGATTTCTATCTCAATGGAAAACAAGATGCCTTGGAACCTTTCCCGGATGGTTCTGAGAGGTAG 1305 0.4169 MAGRRDALLTRDKGQSVLGSRILVAVVIGILLGCIFAFLSPHGFFTSNRPFHNPRIGVADLQIGSSTCESPEQVNALKADILSVTQKNSELKKQIKSLMENLRLAEQGKHHAQEQFVTLGEKHKAGPFGTVKGLRTNPSVIPDESVNPRLAKILEDVAIYKELIVALANSNVKEMLEVWFTNIKKVGIPNFLVVALDDSTEEFCKSNDVPVYRRDPDEGIDTIARTGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHNNMTAYGFNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVARRLSREPKSWDQAVFNEELFFPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVIVHVNYHPDKFARMKAVVDFYLNGKQDALEPFPDGSER 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0256 434 PANTHER GLYCOSYLTRANSFERASE 1 433 - -
Sto5g0256 434 Coils Coil 74 115 - -
Sto5g0256 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 164 375 IPR029044 -
Sto5g0256 434 Pfam Nucleotide-diphospho-sugar transferase 188 407 IPR005069 -
Sto5g0256 434 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Sto5g0256 434 PANTHER ARABINOSYLTRANSFERASE RRA3 1 433 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0256 Sto-Chr5 1500534 1502418 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0256 K20783 - gmx:100804935 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0256 5 1500534 1502418 Sto5g0256 5 1500534 1502418 ECH