Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0235 ATGGACAAGAGCCATGAAATTGATGTACAAGATCAAAAACCAGTTCGCTTGCCTGGCAAAGATGGTAGCAAAATTCCCTGCATATGGCCATCATCTCCTAAACCTGGACATAAAATTGAGATAGGCAAGCAGATCTTTTGCAACCGGTCACTGAATATGAAGAACATTGTTGCCGTGGGATTTGATATGGATTATACTCTGGCACAATACAAGCCAGAAACTTTTGAGTCCCTTGCTTATCAAGGCACAATTCAAAAGCTAGTTTATGATTTGGGATACCCTCTAAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTCAATGTTTTGTCAAAAGAAGATAAAGTTGGGACCTACGGAAATACTTTAGTAAGCAATTCTTTTGATGAGCCAGACTATGCTCTGATTGATACGCTCTTCTCACTTGCCGAAGCCTATTTGTTCGCGCAATTGGTTGATTTTAAGGACAGTCATCCTGGAGAAATTCCAGAGCATGTTGATTATGCTCACATGTACAAAGATGTTCGAGCTGCTATTGATATGTGTCACCGAGATGGGACATTGAAACAAATGGTAGCAAAAGGCCCCAAAAGGTATATTAATGAAGACCCTTCTATAGTGCCCATTCTTAAAATGCTCAGAGCTTCTGGACGTGCTACATTTCTGGTGACAAATAGTTTATGGGACTATACGAACACTGTCATGAATTTCCTCTGTGGATCCAGTGTGGTTGATGGCAGTGCCAATTTTGGTTGGCTTCAATACTTCGATGTGGTTGTCACGGGCAGTGCAAAGCCAAGCTTTTTCAATGAAGAAAACCGTGCCAACCTATTTGAGGTTGAGCTTGAGACTGGAATGCTAATTAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGTGATATCTCAGCAAGGTTATTGCCAGATGACAAGGAAGTGTGTAAAGTTTTCCAGGGAGGCAGCGTTCGTCATCTGCATAAACTACTTTCAGTGGCATCTAGTTCGCAGGTTCTGTATGTTGGTGATCACATTTATGGAGATATATTACGCAGCAAAAAGGTTCTTGGATGGAGGACAATGCTTGTAGTCCCAGAGCTTGAGAAGGAGGTTAAACAACTTTGGGAATCTAGAAATAGCCGGAAGGAACTTCAATTCTTGAGGAGTGAACGTGATCGTGTTGAGGACGAAATACATCGATTGAAGTGGTCTCTTGACTCCAAGAATCCAAAAGATGTAGATCCAAAGTTATTATCAGAACTTGATAAACTGGAGTTTGAACGAGAGAGAGTGCGTTCAAGTCACCAAGAAATTCAACGGGAATTACACCAGAGATTCCACAAGGTATGGGGCCAGCTTATGAAGACCGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGGTTTGCGTGCCTTTATACTAGCCAAGTGTCCAACTTGGGATTGTACTCTCCAAACAAGTACTATAGAACCAGTGAAGACTTTATGCCGCATGAATTTAACATTGTTGCTTATGAGCCTCGTGAAATGGTGGCTTAG 1548 0.4193 MDKSHEIDVQDQKPVRLPGKDGSKIPCIWPSSPKPGHKIEIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIQKLVYDLGYPLKMDRHKYVKVAYHGFNVLSKEDKVGTYGNTLVSNSFDEPDYALIDTLFSLAEAYLFAQLVDFKDSHPGEIPEHVDYAHMYKDVRAAIDMCHRDGTLKQMVAKGPKRYINEDPSIVPILKMLRASGRATFLVTNSLWDYTNTVMNFLCGSSVVDGSANFGWLQYFDVVVTGSAKPSFFNEENRANLFEVELETGMLINTDNGSPMPQVGDISARLLPDDKEVCKVFQGGSVRHLHKLLSVASSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKQLWESRNSRKELQFLRSERDRVEDEIHRLKWSLDSKNPKDVDPKLLSELDKLEFERERVRSSHQEIQRELHQRFHKVWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLYSPNKYYRTSEDFMPHEFNIVAYEPREMVA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0235 515 Coils Coil 423 443 - -
Sto5g0235 515 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 7 94 IPR008380 -
Sto5g0235 515 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 95 506 IPR008380 -
Sto5g0235 515 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 95 386 IPR008380 -
Sto5g0235 515 MobiDBLite consensus disorder prediction 1 20 - -
Sto5g0235 515 PIRSF NT5C2 27 94 IPR016695 -
Sto5g0235 515 PIRSF NT5C2 95 514 IPR016695 -
Sto5g0235 515 Pfam 5' nucleotidase family 95 503 IPR008380 -
Sto5g0235 515 Pfam 5' nucleotidase family 45 94 IPR008380 -
Sto5g0235 515 MobiDBLite consensus disorder prediction 1 18 - -
Sto5g0235 515 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 7 94 - -
Sto5g0235 515 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 95 506 - -
Sto5g0235 515 Gene3D - 41 88 IPR023214 -
Sto5g0235 515 Gene3D - 175 396 IPR023214 -
Sto5g0235 515 SUPERFAMILY HAD-like 43 504 IPR036412 -
Sto5g0235 515 Coils Coil 379 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0235 Sto-Chr5 1369232 1373614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0235 - - gmx:100793438 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0235 5 1369232 1373614 Sto5g0235 5 1369232 1373614 ECH