Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto5g0223 | ATGCAGGGAATTTTGCGGGGAGTACGATTGCGACAAAACCCTCCGAGGGCTGCAATTTTACAACAAATCCATGGCAATGGAATCATCAACATAGAAGGCATATGCGCAGGCTTTGGATGTGTGACGTCGTCTCCAGCAATGCAGCAGAAAGGTTTGGAGAATGTTACAGTTTCAGATGTTCTAATGACAAAGGGAGAAGAAAAGTTTGGCTCATGGCTATGGTGTCGAGTTGATGATGCTGTTATTAATGCAATGAAGAATAGATTTCAGATGGCTGAAAACAATGTTGGATCACTGGCGGTGATCAAGCCGGAGGGTCATATAGCAGGAATTGTCACAGAAAGAGACTGCTTGAAGAAAATAATCGCACAAGGAAGATCTCCTGTATCCACAAGAATTGGCGAAATTATGACTGATGAGAGCAAACTAATAACGGTGACCTCTGGCACGAACATTCTAGAAGCAATGCGGATTATGACAGAGAATAATATAAGGCATGTTCCAGTAATAGATGGGAGGGTAGTGGGTATGATTTCTATTGTAGATGTGGTAAAAGCAGTGATGGAGCAGCAAAACGGAGAATTGAAGCGACTCAATGACTACATTAAAGGAGAATACTACTAG | 624 | 0.4231 | MQGILRGVRLRQNPPRAAILQQIHGNGIINIEGICAGFGCVTSSPAMQQKGLENVTVSDVLMTKGEEKFGSWLWCRVDDAVINAMKNRFQMAENNVGSLAVIKPEGHIAGIVTERDCLKKIIAQGRSPVSTRIGEIMTDESKLITVTSGTNILEAMRIMTENNIRHVPVIDGRVVGMISIVDVVKAVMEQQNGELKRLNDYIKGEYY | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto5g0223 | 207 | ProSiteProfiles | CBS domain profile. | 137 | 195 | IPR000644 | - | |
| Sto5g0223 | 207 | PANTHER | CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN | 1 | 206 | - | - | |
| Sto5g0223 | 207 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL | 1 | 206 | - | - | |
| Sto5g0223 | 207 | ProSiteProfiles | CBS domain profile. | 62 | 129 | IPR000644 | - | |
| Sto5g0223 | 207 | SUPERFAMILY | CBS-domain pair | 71 | 202 | IPR046342 | - | |
| Sto5g0223 | 207 | Pfam | CBS domain | 133 | 188 | IPR000644 | - | |
| Sto5g0223 | 207 | Pfam | CBS domain | 75 | 121 | IPR000644 | - | |
| Sto5g0223 | 207 | SMART | cbs_1 | 142 | 188 | IPR000644 | - | |
| Sto5g0223 | 207 | SMART | cbs_1 | 78 | 122 | IPR000644 | - | |
| Sto5g0223 | 207 | Gene3D | - | 49 | 206 | IPR046342 | - | |
| Sto5g0223 | 207 | CDD | CBS_pair_bac_euk | 75 | 185 | IPR044725 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto5g0223 | Sto-Chr5 | 1309820 | 1310777 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto5g0223 | - | - | gmx:100778020 | 316.235 |
Event-related genes