Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0215 ATGGGAACCCTAGGAAAAGCCATATACACCGTTGGATTCTGGATTCGAGAGACTGGGCAGGCCATTGATCGCCTCGGTTGTCGCCTCCAGGGCAGCTACTACTTCCAAGAGCAGCTGTCTAGGCATCGAACTCTGATGAACATATTTGATAAGGCTCCTGCTGTTGATAAGGACGCATTTGTTGCCCCAAGTGCCTCCATCATTGGAGATGTGCAAGTTGGAAGAGGATCATCAATTTGGTATGGATGTGTCTTGAGAGGTGATGTGAACAGCATCAGTGTTGGAAGTGGAACTAACATACAGGATAACTCTTTGGTGCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCAACTATTATTGGGGACAATGTCACTGTTGGTCATAGTGCAGTTTTACACGGTTGTACTGTCGAGGATGAGGCTTTTGTTGGTATGGGTGCAACACTACTTGATGGTGTCTTTGTTGAGAAACATGCTATGGTTGCTGCAGGAGCCCTTGTGAGGCAGAATACAAGGATTCCCTGTGGGGAGGTATGGGGAGGCAATCCAGCAAAGTTCCTGAGGAAGCTCACCGGTGAAGAGATAGCATTTATCTCCCAATCAGCCACCAATTATAGTAACCTTGCACAGGTCCATGCAGCTGAAAATGCAAAATCCTTTGACGAAATTGAGTTTGAGAAGGTGCTGAGGAAGAAGTTTGCACGTCGAGATGAGGAGTACGACTCAATGCTGGGTGTTGTTCGTGAAACCCCTCCAGAGCTTATTCTTCCGGATAATGTTCTTCCAAATAAAGCACAAAAAGCTTCTTAA 816 0.4608 MGTLGKAIYTVGFWIRETGQAIDRLGCRLQGSYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVFVEKHAMVAAGALVRQNTRIPCGEVWGGNPAKFLRKLTGEEIAFISQSATNYSNLAQVHAAENAKSFDEIEFEKVLRKKFARRDEEYDSMLGVVRETPPELILPDNVLPNKAQKAS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0215 271 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Sto5g0215 271 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
Sto5g0215 271 CDD LbH_gamma_CA_like 55 212 - -
Sto5g0215 271 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Sto5g0215 271 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 270 - -
Sto5g0215 271 Gene3D Hexapeptide repeat proteins 43 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0215 Sto-Chr5 1287535 1290475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0215 K01726 - csin:114318815 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0215 5 1287535 1290475 Sto5g0215 5 1287535 1290475 ECH