Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0204 ATGCAGAAAACTGTGGTGTCAGTAGAACTAGTGTGTTCAAAATGCCGGCAAAGGGTGATGAAATTAATTGCAACCGTTGAAGGAATTACTTCAATCGTCCTGGATCCGGCCAAAAACACAGTGACAGTCATTGGTGAAGCGGATCCAGTGAGGATCATCAAGAAGGTAAGAAAGTTCAGAAAATCAGCTGTAATTGTGAGTATTGGTCCTTccaaagaagagaagaaggaagagaagaaagacgagaagaaagaagagaagaaagacgAGAAAAAAGATGGCAAAACAGATGCTCTTACTCACGCTCACAAAGTGTGTCACAGATGCGATGCCGAAAATTTGCCGTCGCCGGAGAGAATTGCTGCCATAAAAACCGCTCTTTCCGTGGCTGCCTCAGTCGCCGCGTCGGTGGTTCTCTTCCGTTCCACGGTCTCCGATCTGATTCCCGATGCAGTTTATCACCGACTTCGAAATCTCACGAACCGTCTCTTGTCTCAGCTCACCGTAGTCGTTGAAGAATTCGACGGTCTCGCTACCAACCAAATGTTTGAGGCTGTCAACATCTACTTAGGCTCCAAGCTCACATCTTCCGCCCAAAGAATTAAGGTTCACAAGCCCGTCAAAGAAAACCAATTAGCTGTCACCATAGACAAGAATCAGGAATTTCACGATTCGTACAAGGGTGTGAAATTCAAGTGGGTCCTGATCTCTTCGCGCAATGATATTCCTGTTTCTAACTCCAAGCGCAACTCTGCAATTGAGCGATCTGAAATTCGTCACTTTGagctcactttaaattccaaaCACAGGAATATGGTTCTGAGCTCTTATTTGCCTTACATTCTACACATGGCAAAAACAATTAAGGAAGAGAAGAAGACGGTCAAGCTTCATACCATTGATTACAATGGCACCGACTACTGGAGTTCCATCAATCTCAACCACCCTGCCACGTTTGATTCCGTAGCCATGGAACCTGAGATGAAAAGGGAATTGTTAGAAGATCTTCATTTATTCATTGGGAGGAAGGAGTATTACAAAAGAGTAGGGAAGGCTTGGAAACGTGGGTACTTGTTGTATGGACCTCCAGGTACAGGAAAGTCCACTTTGATTGCTGCCATGGCCAATTATCtcaaatttgatatatatgacCTGGATTTGAGGGAGGTGCAGTGCAATTCTGATCTCAGAAGACTGTTGATCGGCACTGGAAGCCGCTCGATACTGGTGATCGAAGACATTGATTGCTCTGTAGAATTGCAGAATCGGGAGGCGGACGATGAATCTGCTAAATCTGTAGAAGATGAAAAGGGCAATTTTTCTTCAAAGGTTACTCTGTCGGGGCTGTTAAACTTTATAGATGGATTGTGGTCGAGCTGTGGAGATGAGAGAATAGTGATATGTACGACGAATCACAAGGAACGTCTAGATCCAGCATTGTTGAGACCTGGTCGGATGGATGTGCACATTCACATGTCCTATTGCTCTTTCGGTGGTTTCAAAATATTAGCGGCTAACTACCTGCGAATTCAGAATCACTCACTGTTTGAAGACATAGAGAATCTGTTGCAGAAGGTTAATGCAACACCTGCTGAAGTGGCAGGAGAGTTAATGAAAAGTGCTGATGCAGACAATGCCCTCCAAGGGCTCCTCAAGTTCCTTCAGCGCAAGCACGCCGAGACCTTACAACAATGTTAA 1698 0.4264 MQKTVVSVELVCSKCRQRVMKLIATVEGITSIVLDPAKNTVTVIGEADPVRIIKKVRKFRKSAVIVSIGPSKEEKKEEKKDEKKEEKKDEKKDGKTDALTHAHKVCHRCDAENLPSPERIAAIKTALSVAASVAASVVLFRSTVSDLIPDAVYHRLRNLTNRLLSQLTVVVEEFDGLATNQMFEAVNIYLGSKLTSSAQRIKVHKPVKENQLAVTIDKNQEFHDSYKGVKFKWVLISSRNDIPVSNSKRNSAIERSEIRHFELTLNSKHRNMVLSSYLPYILHMAKTIKEEKKTVKLHTIDYNGTDYWSSINLNHPATFDSVAMEPEMKRELLEDLHLFIGRKEYYKRVGKAWKRGYLLYGPPGTGKSTLIAAMANYLKFDIYDLDLREVQCNSDLRRLLIGTGSRSILVIEDIDCSVELQNREADDESAKSVEDEKGNFSSKVTLSGLLNFIDGLWSSCGDERIVICTTNHKERLDPALLRPGRMDVHIHMSYCSFGGFKILAANYLRIQNHSLFEDIENLLQKVNATPAEVAGELMKSADADNALQGLLKFLQRKHAETLQQC 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0204 565 SMART AAA_5 353 496 IPR003593 -
Sto5g0204 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 539 IPR027417 -
Sto5g0204 565 ProSitePatterns AAA-protein family signature. 464 482 IPR003960 GO:0005524|GO:0016887
Sto5g0204 565 Pfam Domain associated at C-terminal with AAA 151 236 IPR025753 -
Sto5g0204 565 Gene3D - 1 74 - -
Sto5g0204 565 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 118 558 - -
Sto5g0204 565 PANTHER BCS1 AAA-TYPE ATPASE 118 558 - -
Sto5g0204 565 CDD AAA 354 494 - -
Sto5g0204 565 Gene3D - 491 562 - -
Sto5g0204 565 Pfam ATPase family associated with various cellular activities (AAA) 358 493 IPR003959 GO:0005524|GO:0016887
Sto5g0204 565 MobiDBLite consensus disorder prediction 70 98 - -
Sto5g0204 565 Coils Coil 72 93 - -
Sto5g0204 565 Pfam Heavy-metal-associated domain 6 59 IPR006121 GO:0046872
Sto5g0204 565 SUPERFAMILY HMA, heavy metal-associated domain 1 65 IPR036163 GO:0046872
Sto5g0204 565 Gene3D - 309 490 IPR027417 -
Sto5g0204 565 CDD HMA 12 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0204 Sto-Chr5 1217858 1221323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0204 278 487 Miscellaneous Gene Families AT3G47060 30.870 7.82e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0204 K08900 - jre:108991354 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0204 5 1217858 1221323 Sto5g0204 5 1217858 1221323 ECH