Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0199 ATGATCCAAAATGATGAAATCAGTCCAAGTGAAGGAATTGTGGAGGGAGAGGTGAATTATAAAGCGAAGGCGAGAAGAAAGGGAGAATTGAAGAAGGTGGGAATTGAAGTGGAGGTGGGATCTGTATGTAAGGAAGAAAGATGCATAGCTCGGATTCCGTCTCTGCAAAGAAAGACATTCATCATGATCTCCCACTTCTTCGTGCTCTCACAGGGAGCCGACAACGTTGTCTTCCGTGACTATCGTGGTGAAGTACAAAAAGCAAGTGCTGAGACATTTTCCCCAAAAGTGAAGTTCTGGAAGGAGGATGGTGAAGAAGATGCTCCACCTAATATAGATGGCGTGAACTACTTTCATGTGAAGGTTGCTGGATTGTTTTTTGTTGCTACAACTAGAGTCAATGTCTCCCCTTCTCTTGCTTTGGAACTTTTACAAAGGATTGCACAGTTCATAAAAGATTACCGTGATGTTCTTAATGAAGATTCATTGAGGAAAAATTTTGTGCTCGTGAATGAATTGCTGCTTGAAGTCATTGCACATTGGCAAACTGTACTAAAGCCTGCTTGTCCCAGGACTTGGGTTATGTGCGAACAACATCAACTGAGAAAGGGACCAAAAAAAATGCCAGCAACAGCTATTACAAAATCAGTTGTTGCCAATGAACCTGGTGGCAGGATAAGGGATGAGATTTTTGTTGATATTCGACTTGCTCTCAATGAGGACCTGAGGATTGGAAGAACTGACTACAGAAGTTCTGGTGTTGTTATTCTAGATGATTGTAACTTCCATGAATCTGTACACCTTGATAGTTTTGATGTTGACCGAATGTTGACAGGGGTGCCACCAGATGGTGAATTTCCTGTCATGAACTATCGAATGACTCAACCATTTAAGCCACCCTTTCGTATCAATGCATTGATTGAAGAGACAGGATCCCTTACGGTGATTTGA 951 0.4196 MIQNDEISPSEGIVEGEVNYKAKARRKGELKKVGIEVEVGSVCKEERCIARIPSLQRKTFIMISHFFVLSQGADNVVFRDYRGEVQKASAETFSPKVKFWKEDGEEDAPPNIDGVNYFHVKVAGLFFVATTRVNVSPSLALELLQRIAQFIKDYRDVLNEDSLRKNFVLVNELLLEVIAHWQTVLKPACPRTWVMCEQHQLRKGPKKMPATAITKSVVANEPGGRIRDEIFVDIRLALNEDLRIGRTDYRSSGVVILDDCNFHESVHLDSFDVDRMLTGVPPDGEFPVMNYRMTQPFKPPFRINALIEETGSLTVI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0199 316 SUPERFAMILY SNARE-like 62 178 IPR011012 -
Sto5g0199 316 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 233 311 IPR036168 -
Sto5g0199 316 Pfam Adaptor complexes medium subunit family 233 311 IPR028565 -
Sto5g0199 316 Gene3D Mu homology domain, subdomain B 176 314 - -
Sto5g0199 316 PANTHER AP-4 COMPLEX SUBUNIT MU-LIKE 63 234 - -
Sto5g0199 316 PANTHER AP-4 COMPLEX SUBUNIT MU-LIKE 233 314 - -
Sto5g0199 316 PANTHER AP COMPLEX SUBUNIT MU 63 234 - -
Sto5g0199 316 PANTHER AP COMPLEX SUBUNIT MU 233 314 - -
Sto5g0199 316 ProSiteProfiles Mu homology domain (MHD) profile. 203 316 IPR028565 -
Sto5g0199 316 Gene3D - 61 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0199 Sto-Chr5 1185177 1189234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0199 K12402 - gmx:100800985 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0199 5 1185177 1189234 Sto5g0199 5 1185177 1189234 ECH