Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0190 ATGGTGAGGAGAGCGGAGCCCATAGCGGTGGTTCACCCGGCTTCGGCGGATGACGTGGCAAGGGTAGTTGGGGCAGCGTACCAGTCGGCGCATGGGTTGAGGGTGTCAGCTAGGGGCCACGGGCATTCCATAAACGGGCAGGCGGGGGCGAGGAAGGGGGTGGTGATAGAAATGAGCAGTAGAGAGAGGGAAGTGAGAATGGGAGTGGGGGAGAAGGGAAGCTACGTGGAGGTGTGGGGTGGAGAGTTGTGGATACAAGTCTTGAGGAAGACGGTCCACTATGGGATGGCGCCTAAGTCATGGACCGATTACTTGTATTTGTCAGTGGGAGGAACCCTATCCAACGCTGGCATCAGTGGCCAGACCTTCAATCACGGCCCTCAGATCAACAATGTCTACGACCTCGACGTCGTTActgGTAAAGGTGAGTTGGTGACGTGCTCAGAAGACCGTAACCCACACTTGTTTCATGCGGTTCTTGGGGGTCTTGGACAATTTGGGATCATCACTAGAGCTACAATTGCTCTTGAACCAGCTCCTCACAGGGTTCGTTGGATACGAGTACTATACTCGAATTTTTCAACCTTTACAAAGGACCAAGAGTATCTGATCTCTTTGCATGGGAAACCAGCAAAGGAGAGATTCGACTACGTGGAGGGTTTCGTGATAGTAGATGAAGGGCTCATCAATAATTGGAGATCCTCATTCTTCTCACCAACTAACCCTATTAAATTAGATTCCCTCAAACCCCATGGCGGTGTCTTGTACTGCTTGGAGATTACCAAAAATTACCAACAACCCAATGCACATACTATTGATCAGGAAATAGATGATCTGTTGAAAAAGTTAGATTTCATACCAAAAACGGTGTTTACGACAGACTTGGCATATGTGGATTTTCTGGACCGAGTACACAAGTCTGAGCTAAAGATGAGGTCCAAGGGTTTATGGGAAGTCCCGCATCCATGGCTGAACCTTTTTGTTCCGAAATCAAGGATTGCGGATTTCGACAAAGGTGTGTTCAAGGGCATTCTAGGAAACAAGACAAGTGGGCCCATCCTCATCTACCCCATGAACAAGAACAAGTGGGACGAGAGGAGCTCGGTGGTGACACCAGAGGAGGAGGTGTTTTACTTAGTGGGATTTCTTCGATCAGCTTTGGACAGTGAGACACTGGAGAAGCTGAGGAGGCAGAACCGTCAGATTCTGAGGTTCTGCGATGATGCAAGCATCAAGGTGAAACAGTATCTACCCCATTACACAAGGGAGGAGGAGTGGAAGGACCACTTTGGGGATAAGTGGGACCACTTTTATCACATGAAGATGGAGTACGACCCCCGGCGCATCTTAGCCACTGGCCAGCGCATTTTTAAGCCCTCCATCACTACCACTACTGATATGTAG 1404 0.4936 MVRRAEPIAVVHPASADDVARVVGAAYQSAHGLRVSARGHGHSINGQAGARKGVVIEMSSREREVRMGVGEKGSYVEVWGGELWIQVLRKTVHYGMAPKSWTDYLYLSVGGTLSNAGISGQTFNHGPQINNVYDLDVVTGKGELVTCSEDRNPHLFHAVLGGLGQFGIITRATIALEPAPHRVRWIRVLYSNFSTFTKDQEYLISLHGKPAKERFDYVEGFVIVDEGLINNWRSSFFSPTNPIKLDSLKPHGGVLYCLEITKNYQQPNAHTIDQEIDDLLKKLDFIPKTVFTTDLAYVDFLDRVHKSELKMRSKGLWEVPHPWLNLFVPKSRIADFDKGVFKGILGNKTSGPILIYPMNKNKWDERSSVVTPEEEVFYLVGFLRSALDSETLEKLRRQNRQILRFCDDASIKVKQYLPHYTREEEWKDHFGDKWDHFYHMKMEYDPRRILATGQRIFKPSITTTTDM 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0190 467 SUPERFAMILY FAD-binding/transporter-associated domain-like 4 178 IPR036318 GO:0050660
Sto5g0190 467 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 180 457 IPR015345 GO:0009690|GO:0019139|GO:0050660
Sto5g0190 467 SUPERFAMILY FAD-linked oxidases, C-terminal domain 180 457 IPR016164 GO:0003824|GO:0050660
Sto5g0190 467 Gene3D - 58 181 IPR016169 -
Sto5g0190 467 PANTHER CYTOKININ OXIDASE 5-RELATED 3 462 - -
Sto5g0190 467 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 7 42 IPR006093 GO:0016491
Sto5g0190 467 Gene3D - 4 458 IPR016167 -
Sto5g0190 467 ProSiteProfiles PCMH-type FAD-binding domain profile. 3 179 IPR016166 GO:0071949
Sto5g0190 467 PANTHER GULONOLACTONE OXIDASE 3 462 - -
Sto5g0190 467 Gene3D - 183 416 IPR016170 -
Sto5g0190 467 Pfam FAD binding domain 7 148 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0190 Sto-Chr5 1132448 1136539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0190 K00279 - vvi:100267760 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0190 5 1132448 1136539 Sto5g0190 5 1132448 1136539 ECH