Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0161 ATGTCCTCGGTCGAAACGGAGAAGAAGGCTGAGGAAGAGAAGGAGGAGGCGAGAGGGGGAGAGCTACTGTTCTGCGGTGCTACGTGTTGGGATATCATTGGTCGTCGCAAAGGCTCTCTCGAAGGCAACTTGGTGTCGCCAACACGGCTTCGTCCTCTCGTCGGCGTTGATATTCGATTCATTGCTTCTGGTTGTGTCTTGAGATTTGGTGCACAGAAGGGGCAGCTGGGTCATGGAGATATGATTCCGCGTGATAGACCAACTGTGGTGTCTGAACTTTTCAAATACAAAATTATTAAAGCTGGAGCAGGTAGGAGCCACACGGTGGTTGTTACTGAGGATGGAAAGTCCCTTGCTTTTGGTTGGAATAAGCATGGGCAGCTTGGTTCAGGTTCTGTGAAAAATGAAATTGAGTCATCTCCGGTTTGCTGTCTTGTGTCAGAAGTAAAAAATACTGCTTGCGGTGGTGATTTCACTGTGTGGTTGTCTTCTGTTGAAGGAGCTTCTATATTGACTGCAGGGCTTCCACAATATGGACAGCTTGGGCATGGAACAGATAACGAGTACAATTCCAAAGACAGCTCTGTGAAGTTAATTTATGAAGCCCAACCGCGCCCTCGAGCAATTGCTACTCTTGCTGGGGAAACAATTGTCAAAGTGGCATGCGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTTCGTTTACACGTGGGGCTTTGGTGGTTATGGAAGGCTAGGACATAGGGAGCAGAAGGATGAATGGGTCCCACGCCGCGTTGATGTTTTTCAGAATAGAAATGTTCTGCCTCCTGATGCAGTAATTTCAGCGGGTTCTGCTAACTCCTCATGTACTGCAGGTGGAGGACAGTTGTATATGTGGGGTAAAATAAAGAATTCTGGTGATGACTGGATGTATCCCAAGCCTTTAATGGATTTAAGTGGCTGGAATATAAGATGCATGGATTCAGGCAATATGCACCACTTTGTTGGGGCTGATTCCTCGTGCATAAGTTGGGGCCATGCTCAGTATGGAGAGCTGGGATATGGACCTAATGGACAGAAGTCTTCAGCTGTACCTAAGAAGGTGGATGTTCTTGAGGGCATGCATGTTATAAGTGTAGCTTGTGGTATGGGTCATTCCATGGTTATTGTTGACAAAACAAATGTCGGTGAGCGACTTGACCAGCTTGATATATTCGACGGCAAAGCTTCTGCTGAAGGGATTGAAGAACCTGCTAGCAAAACTCCAGTGCCTAAGAAGAAGACTGCAAAGAAAGGTGCTAAAAAGGCTGACAAAtctaagaagaggaagaagtcGAATGATTCATCTGAAtctgaagaggaagaggaagaggttgATGAGCAAAGTGACTATGGTAGTGAGGAGCAAGTCAATGGCGAGGCAGAGGGCAAAAGGCAACGTGGTGGAAATAATTCTGGCAAAGGTCGAGGTAAGGCATCCAAGAAATCTGTTGCTGAGGGAAAAGGTTCTGGCCGTGGGCGTGGTCGTCCCCCTGCAGCAAAGAAGACATCAAGCTCTTCCCAAGGAAAAACTGGTGCTAGAAGACCCCGAAAGTCATGA 1587 0.4594 MSSVETEKKAEEEKEEARGGELLFCGATCWDIIGRRKGSLEGNLVSPTRLRPLVGVDIRFIASGCVLRFGAQKGQLGHGDMIPRDRPTVVSELFKYKIIKAGAGRSHTVVVTEDGKSLAFGWNKHGQLGSGSVKNEIESSPVCCLVSEVKNTACGGDFTVWLSSVEGASILTAGLPQYGQLGHGTDNEYNSKDSSVKLIYEAQPRPRAIATLAGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVDVFQNRNVLPPDAVISAGSANSSCTAGGGQLYMWGKIKNSGDDWMYPKPLMDLSGWNIRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAVPKKVDVLEGMHVISVACGMGHSMVIVDKTNVGERLDQLDIFDGKASAEGIEEPASKTPVPKKKTAKKGAKKADKSKKRKKSNDSSESEEEEEEVDEQSDYGSEEQVNGEAEGKRQRGGNNSGKGRGKASKKSVAEGKGSGRGRGRPPAAKKTSSSSQGKTGARRPRKS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0161 528 MobiDBLite consensus disorder prediction 446 462 - -
Sto5g0161 528 MobiDBLite consensus disorder prediction 409 528 - -
Sto5g0161 528 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 234 289 IPR000408 -
Sto5g0161 528 MobiDBLite consensus disorder prediction 420 437 - -
Sto5g0161 528 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 375 385 IPR000408 -
Sto5g0161 528 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 115 165 IPR000408 -
Sto5g0161 528 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 335 388 IPR000408 -
Sto5g0161 528 Gene3D - 8 196 IPR009091 -
Sto5g0161 528 PRINTS Chromosome condensation regulator RCC1 signature 98 111 IPR000408 -
Sto5g0161 528 PRINTS Chromosome condensation regulator RCC1 signature 117 133 IPR000408 -
Sto5g0161 528 PRINTS Chromosome condensation regulator RCC1 signature 220 236 IPR000408 -
Sto5g0161 528 PRINTS Chromosome condensation regulator RCC1 signature 236 250 IPR000408 -
Sto5g0161 528 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 220 230 IPR000408 -
Sto5g0161 528 PANTHER PROTEIN RCC2 6 516 IPR028641 -
Sto5g0161 528 SUPERFAMILY RCC1/BLIP-II 19 389 IPR009091 -
Sto5g0161 528 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 101 111 IPR000408 -
Sto5g0161 528 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 168 233 IPR000408 -
Sto5g0161 528 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 64 114 IPR000408 -
Sto5g0161 528 Gene3D - 197 397 IPR009091 -
Sto5g0161 528 Pfam Regulator of chromosome condensation (RCC1) repeat 99 127 - -
Sto5g0161 528 Pfam Regulator of chromosome condensation (RCC1) repeat 233 280 IPR000408 -
Sto5g0161 528 Pfam Regulator of chromosome condensation (RCC1) repeat 339 385 IPR000408 -
Sto5g0161 528 Pfam Regulator of chromosome condensation (RCC1) repeat 171 230 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0161 Sto-Chr5 927182 932315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0161 - - twl:120009888 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0161 5 927182 932315 Sto5g0161 5 927182 932315 ECH