Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0144 ATGGCTGGAAAGTCGAGGGGCAGAGGAGGATGTTGGGGCTGGTGTCTCGCGTTTCTCGTTCTCGCTCTCGTCGTCGGTGCCATTGTATATGTGGCAGTGAACAAATTCGGCCACAACCACTCCAAAGGCCACGGGTCAGGCGCCACCGACAAAGATTATGCTTCCGCTCTCAAACTTGCAATGCAGTTCTTCGATAtacaaaaatCTGGTAAGTTGGTCGACAACAAAATATCTTGGAGAGGGGATTCGGCTCTCAAAGATGGAAGCCAAGCAAAATTGGATTTATCGAAAGGTATGTACGATGCCGGAGATCACATGAAGTTTGGTTTTCCAATGGCTTTTACTGCCACAGTGTTATCATGGGCCATCTTGGAATATGGAAGTCATATGGAGAAAGTTGACCAGTTGAAACCTGCTCAAGAATCGCTCAAGTGGATCACTGACTATCTCATCAATGCTCATCCTTCTGAGAATGTGCTTTACGTTCAGGTAGGCGACCCTGTAGCAGATCATAAATGTTGGGATAGACCTGAAGACATGACTGAGGAACGGCCACTTGCACAGGTCAACAGTACTAGTCCTGGAACAGACGTTGCTGCAGAAACTGCAGCAGCTATGGCTGCAGCATCTTTGGTCTTTAAGAAGACTAGTTCTACATATTCAAGCAGTCTCCTCAAGCATGCAAAGCAGTTGTTTAATTTTGCGGAAAAATACAGGGGATACTATAGTGACAGTATCCCTGAAGTCCAGACGTATTATAACTCAACAGGATATGGTGATGAGCTCTTATGGGCAGCTAGCTGGCTCTATCATGCTACAAATGATGACTCTTATCTTCGGTATGTGACTGGCCAAAATGGAGAAGACTATGCTGATTGGGGAAATCCAACCTGGTTTAGTTGGGATAACAAGCTTGCTGGAACTCAGGTTTTGTTATCCAGATTAAGCTTCTTTAAGGCCAATGACATTTCCAGTTCGTATGATTCTGGTCTTCAGAATTACAGGAAAACAGCGGAGGCTGTAATGTGTGGCCTCCTTCCAGATTCTCCAACAGCCACAAAAAGCAGATCTGATAATGGTCTTATATGGGTCAGCGAATGGAACTCACTGCAGCAACCTGTTGCTTCTGCATTCTTAGCTACACTTTACAGTGACTATATGGTTACTTCGGACACTGACAAACTACATTGTGATTCAGATTCTTTCAGCCCTGAAGATCTTCGGAACTTTGCCAAATCTCAGGCTGATTATGTGCTGGGTAAGAATCCTATGCATATGAGTTATCTTGTGGGATATGGGGATAAATTCCCAGAATTTGTGCATCATAGGGGAGCTTCAATTCCAGCTGATGAAAACCCTGGTTGCAAAGATGGCTTCCAATATCTCGACTCATCCGATCCTAATCCCAACGAAGCCACTGGAGCACTTGTTGGTGGACCCTTCTTAAATGATACTTATATTGACTCCAGGAACAATTCCATGCAGGCCGAACCGAGCACATATAACACTGCCCTTGTCGTAGGCCTCTTGTCAAGTTTAGTCACTACATCTTCAGCAGTTCAATCCTTTACTTAA 1575 0.4463 MAGKSRGRGGCWGWCLAFLVLALVVGAIVYVAVNKFGHNHSKGHGSGATDKDYASALKLAMQFFDIQKSGKLVDNKISWRGDSALKDGSQAKLDLSKGMYDAGDHMKFGFPMAFTATVLSWAILEYGSHMEKVDQLKPAQESLKWITDYLINAHPSENVLYVQVGDPVADHKCWDRPEDMTEERPLAQVNSTSPGTDVAAETAAAMAAASLVFKKTSSTYSSSLLKHAKQLFNFAEKYRGYYSDSIPEVQTYYNSTGYGDELLWAASWLYHATNDDSYLRYVTGQNGEDYADWGNPTWFSWDNKLAGTQVLLSRLSFFKANDISSSYDSGLQNYRKTAEAVMCGLLPDSPTATKSRSDNGLIWVSEWNSLQQPVASAFLATLYSDYMVTSDTDKLHCDSDSFSPEDLRNFAKSQADYVLGKNPMHMSYLVGYGDKFPEFVHHRGASIPADENPGCKDGFQYLDSSDPNPNEATGALVGGPFLNDTYIDSRNNSMQAEPSTYNTALVVGLLSSLVTTSSAVQSFT 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0144 524 Gene3D - 50 517 IPR012341 GO:0005975
Sto5g0144 524 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 417 443 IPR018221 -
Sto5g0144 524 PANTHER ENDO-1,4-BETA-GLUCANASE 11 524 - -
Sto5g0144 524 PANTHER ENDOGLUCANASE 2 11 524 - -
Sto5g0144 524 SUPERFAMILY Six-hairpin glycosidases 50 516 IPR008928 GO:0005975
Sto5g0144 524 Pfam Glycosyl hydrolase family 9 53 510 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0144 Sto-Chr5 831106 834501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0144 1 523 Glycoside Hydrolase AT1G75680 67.297 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0144 - - gmx:100820195 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0144 5 831106 834501 Sto5g0144 5 831106 834501 ECH