Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0134 ATGAAGGCAACCAAGAGGCCGATCCACGCGCTCGCCACATGGATTCGCCGGCAACCACCCAGGATGAAGGCCTTTCTGGCTGTGGCTTCAGCCATAGCCGCCTTGCTGTTTCTCAGAATGGTCGTTCACGATCACGACAAACTCTTTGTCGCATCCGAGGCCGTTCATGCACTCGGAATATTCGTTCTCATTTACAAGCTCACCAAGGAAAAAACTTGCGTTGGACTTTCACTTAAATCACAGGAACTTACAGCTATGTTTCTAGCTGTCAGACTGTATTGCAGTTTTGTCATGGAATTTGATATACACACCCTACTTGATTCGGCAACATTGGGGACGACCCTCTGGGTTATTTATATGATACGTTTTAAACTGAAATCCAGTTATATGGATGACAAGGACAATTTTGCAATATTCTATGTGGTGGTACCTTGTGTTGTTCTCTCATTTTTGATTCATCCAACCACCCGTCATCATATCTTGAACAGGATTTTCTGGGCCTTTTGTGTTTATCTTGAAGCTGTGTCAGTACTACCTCAGCTCCGTGTCATGCAGAACACTAAGATTGTTGAACCATTCACGGCGCACTATGTTTTTGCTCTTGGAGTTGCTAGGTTCTTGAGTTGTGCACATTGGGTCCTACAGGTATTAGATACTCGAGGTCGTCTTCTAACAGCTTTGGGTTATGGATTATGGCCTTCTATGGTACTGCTATCAGAAATTGTGCAGACTTTCATCCTCGCAGATTTTTGCTACTACTATGTCAAGAGCATTTTTGGTGGACAACTTGTTCTTCGGCTTCCTTCAGGAGtggtttaa 819 0.4396 MKATKRPIHALATWIRRQPPRMKAFLAVASAIAALLFLRMVVHDHDKLFVASEAVHALGIFVLIYKLTKEKTCVGLSLKSQELTAMFLAVRLYCSFVMEFDIHTLLDSATLGTTLWVIYMIRFKLKSSYMDDKDNFAIFYVVVPCVVLSFLIHPTTRHHILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGRLLTALGYGLWPSMVLLSEIVQTFILADFCYYYVKSIFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0134 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Sto5g0134 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Sto5g0134 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Sto5g0134 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Sto5g0134 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Sto5g0134 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Sto5g0134 272 PANTHER LUMEN PROTEIN RETAINING RECEPTOR, PUTATIVE-RELATED 1 271 - -
Sto5g0134 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0134 Sto-Chr5 789519 792586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0134 5 272 Miscellaneous Gene Families AT2G21190 80.970 2.61e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0134 - K10949 jre:109000882 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0134 5 789519 792586 Sto5g0134 5 789519 792586 ECH