Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0125 ATGACTCTCGAAGACTTCTTTACCTTGACTGAGATGAAAGATGGGCTCACAACCCCTTCTCGAGTACAGGAGCTGGTCTCTGTAATGCAGAAGGAGAAAGAGAGTTTTGTCAAGAATGTTGGTGACACAACAAGGCAGTGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTAGATCTTTTTATTCAATTAGATGGACTTTGGTTTATTAATAAGTGGTTAAAAGATGCCCAAAATTTTGGTACTGACACAAATGATGGCTTTGTTGAGGAGTCAATTACTGCACTGTTACGAGCTGTTGGAAAGCTGCATCTAGACAGTGAAAAGTCTACATCATCAGGTATTTGGGTAACTGTTAGAAATCTTCTTGGCCATCGCAGCTCTAGAGTTCAGGAAAGAGCAAGAATATTATTTGATGGTTGGAAGGTGGGTGGAAATAGTGATGCAGATATTCATGATATGGAGGTTGACAAAGTAAATGATGGGAGTGAGAAAATTGTCAGGGAGGAATGTCAACCATCTGCTGTGAATGAAGCTGTCAATGATATTGATCATGCATCAGGCCTTGTAGAAGGCGAGAAATCTCCATTGAGAAGCACGGATACTCTACCACCAGAAAGAGTTGTCAATGTACTGATACAGAGTTCCAGCAATCAGCTTCATTCCCCTAGAAGTTCTGATTGTGAAGATGTCAAACTGAGATCAACAGACCATCTTGCTTATGTTTCAACTGCTGTTGAAGACAAGACCATTTCGGATGGGTCTTGTAGCATTTCAGTGCCAAAGCAAGGCAATGTTGAAGGACAATCAGATGTTACAAAGTTAAATGACTTGTCTGAAATGGAGAAGCAGGAGCAAATTGATAATGGTCCAGCTGAGAAAGTGGCAGGAGAGAACTCTTCTGCATCCACCAAGCCAGAGCTTAACCCTTTTTCAGAAGGTGCTACTGAGGCAAAAGATCTGGAATCAGTTAAAGATCCTGCTTTACAACATAATATCGAAAACAATGAGGATGCTGTCCATCATAAAATAATAACCAGTAGCGTGAGAACAGCCACATCTGATAGAAGGAGTAGGGCAGATGATATTAGGGCTATAAAGTCTAGCAGTCCGCAACTTCTGCAGACTGTAGAAAAGGATGATGATTTTTGTTCTAATGCTTTTCACCGCTCATCAATAAGTGACAGTTACTCAGGAAAGCCTGAGGTGATAGAAACTTCTCTTTCCAAAACAGATTATGTCAGAGCAGCGAAGGAAAGTAAGGGGCATTCTAGTAATGAAGATACCTCAAAAGTTTCTGATTCTACTAAACCTGGAAGAGTTCCCAAAAGCCTTAATATGATTGACAAGAAGAGTTCTGATATTGAACTTGAGTATGGCATGGTTGATGCTTTAGAAGTTGCTCGACAAGTTGCTCAAGAAGTAAGAAGAGAAGTTTGCAGCTCTTCTTCAGAGAAAATTTCAGAAGGTGGAAACCAGCAACCAAGCAGCCCAGATTCCATAAAAAGAAGAGTTTCCAAAAGCCCTAATATGATTGACAAGAAGAGTTCTGACATTGAACTTGAGTATGGCATTGTTGATGCTTTAGAAGTTGCTCGACAAGTTGCTCAAGAAGTAAGAAGAGAAGTTTGCAGCTCTTCTTCAGAGAAAACTTCAGAAGGTGGAAACCAGCAACCTGGCAGCCCAGATTCCATAAAAAGAGAGGATGTACTCACCAGTATCCCACCCCGGGAAGTGCCATCAAGGCAAAGCCACTCTGCAGAGGCATatccagaggaggaggaggagggatgTGTAAGCACATCAGACATTATTGAGGCTGAGCCAGAATGTATACCTGCCAGGGAGTCCTCACAGGTGACTGAAACAGCTCAAGATCCAGGAGGCAATTCAGAGAAAATTCGATGTTCTTTCGATCTCAATGAAGAAGTTGTTTCCGATGATGTGGATGTCTCTTCTGTAAATACTATGTCTACTACACCAATATCTGTTGTCTCTGCTTCAAACTCAGCTGCAACTTCTGAGTTGCCTGCGGCACCTTTACATTTTGAGGGGACACTTGGATGGAAAGGATCGGCTACCGCCAGTGCCTTTTGTCCTGCATCACCTTGTAAAAATTCTGATAGCAAGAAAAATCTTTCTGTTGGTGTAAACTCTGATATTTCCAAGCAGAGGCAGGATTGGCTTAATATTGATCTGAATGTAGCCGAGGGTGAAGATGGATTGGGGAAACAAAATGCTGAATCATCCAGCCTTCCTTCTGGGCAATCATCACTGGAACTTGGTTCTAAAAGATCAAGCAGACTTGAATTGGATTTGAACAGTATTGGTGACGATGTCGATGCCCAACCCTCAGATCACAGGAAGGAGGAACAGCTCTTTAATGGCAGAAATGGTCTTTGGAGATCATCTCCTGCTTCTTCATTATCATCAATGCAACCTTCTGTAAGAAACATTGATTTGAATGACAGGCCATACCTTCAAACTGATTTGGTGGACCAAGGGCATAGGGCGTCTAGATCAGATTGCCCTGTTATCTCTATCTTGGGTACCAAGGTGGAAGTTGGGAGAAAAGACATTGTTCCTCATTCTCTGTCTTTGCCAAATGGCAAGGCTATGGGGCCTGTAGTGGATCTTACAATGTCAAGAGCAGGAGGGGTTTTAGGGATGGGGCCCACAGCCTCTTATAATCATTCAAATATGTTTGGGTATAATGGTCTTGCATCAGCGTCTGGTTTGTCTTATTCATCAAGCGTATACGGGTCAAGTAACACAATTCCATACATGGTGGACTCAAGAGGAGCTCCAGTTGTGCCTCAAGTTGTTGGATCTTCCTCTAGTCTTCCATCATCTTACTCCCAACCTTCATTCATCATGAGCATGACCGGTGCACAACTTGGTTTAAATGGAGTTGGAACTTCACGTCCTAACTTTGACCTAAATTCTGGCTTTATGATTGAGGGTGGGAATAGAGATGCATTGACGGCAAGGCAATTTTTCTTTCCTGGTCAAAGCAGGGCTATGGAAGAGCATTTAAGGACCATTCCACAACCCTCAGGTTCTATCGTTGgagtaaaaagaaaagaaccaGACAGTGGGTGGGAAACATACCCAATGAGCCACAAACAACCACAACCTCCTTGGAAGTAG 3165 0.4202 MTLEDFFTLTEMKDGLTTPSRVQELVSVMQKEKESFVKNVGDTTRQWAAVASTIAATENKDCLDLFIQLDGLWFINKWLKDAQNFGTDTNDGFVEESITALLRAVGKLHLDSEKSTSSGIWVTVRNLLGHRSSRVQERARILFDGWKVGGNSDADIHDMEVDKVNDGSEKIVREECQPSAVNEAVNDIDHASGLVEGEKSPLRSTDTLPPERVVNVLIQSSSNQLHSPRSSDCEDVKLRSTDHLAYVSTAVEDKTISDGSCSISVPKQGNVEGQSDVTKLNDLSEMEKQEQIDNGPAEKVAGENSSASTKPELNPFSEGATEAKDLESVKDPALQHNIENNEDAVHHKIITSSVRTATSDRRSRADDIRAIKSSSPQLLQTVEKDDDFCSNAFHRSSISDSYSGKPEVIETSLSKTDYVRAAKESKGHSSNEDTSKVSDSTKPGRVPKSLNMIDKKSSDIELEYGMVDALEVARQVAQEVRREVCSSSSEKISEGGNQQPSSPDSIKRRVSKSPNMIDKKSSDIELEYGIVDALEVARQVAQEVRREVCSSSSEKTSEGGNQQPGSPDSIKREDVLTSIPPREVPSRQSHSAEAYPEEEEEGCVSTSDIIEAEPECIPARESSQVTETAQDPGGNSEKIRCSFDLNEEVVSDDVDVSSVNTMSTTPISVVSASNSAATSELPAAPLHFEGTLGWKGSATASAFCPASPCKNSDSKKNLSVGVNSDISKQRQDWLNIDLNVAEGEDGLGKQNAESSSLPSGQSSLELGSKRSSRLELDLNSIGDDVDAQPSDHRKEEQLFNGRNGLWRSSPASSLSSMQPSVRNIDLNDRPYLQTDLVDQGHRASRSDCPVISILGTKVEVGRKDIVPHSLSLPNGKAMGPVVDLTMSRAGGVLGMGPTASYNHSNMFGYNGLASASGLSYSSSVYGSSNTIPYMVDSRGAPVVPQVVGSSSSLPSSYSQPSFIMSMTGAQLGLNGVGTSRPNFDLNSGFMIEGGNRDALTARQFFFPGQSRAMEEHLRTIPQPSGSIVGVKRKEPDSGWETYPMSHKQPQPPWK 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0125 1054 MobiDBLite consensus disorder prediction 553 568 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 420 452 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 489 509 - -
Sto5g0125 1054 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 548 638 - -
Sto5g0125 1054 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 509 1054 - -
Sto5g0125 1054 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 509 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 746 818 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 770 800 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 621 635 - -
Sto5g0125 1054 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 509 - -
Sto5g0125 1054 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 509 1054 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 802 818 - -
Sto5g0125 1054 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 147 IPR035441 -
Sto5g0125 1054 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 19 150 IPR035441 -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 1023 1054 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 749 769 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 301 315 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 287 317 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 487 518 - -
Sto5g0125 1054 MobiDBLite consensus disorder prediction 420 439 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0125 - - gmx:102669951 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0125 5 730925 742652 Sto5g0125 5 730925 742652 ECH