Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0121 ATGATAGCAGATGGAATTGAGGACGAAGAGAAATGGCTCGCAGAGGGGATAGCAGGCATTCAACACAATGCCTTCTACATGCATCGCGCTCTGGATGCCAACAATCTCAGAGAAGCCCTAAAATATTCAGCTCATATGCTATCCGAGCTTCGAACTTCTAAGCTTTCGCCGCACAAATATTATGATCTTTATATGAGAGCCTTCGATGAGCTCAGGAGGTTGGAGATATTTTTCAAAGATGAGAGCAGACACGGCGTTTCAATTGTTGATTTATATGAGCTTGTCCAGCACGCTGGAAATATATTGCCTAGACTGTATTTATTATGTACGGTAGGATCTGTTTATATCAGATCTAAGGAGGCTCCAGTCAGGGATGTTCTTAAGGATCTGGTGGAAATGTGTCGTGGTGTTCAACATCCAATTCGTGGTCTGTTTTTGAGGAGTTACCTTTCTCAAGTCAGTAGAGATAAGTTACCTGATATTGGTTCTGAATATGAAGGGGATGCTGACAGTGTGATGGACTCTGTTGAATTTGTTCTACAGAATTTCACGGAAATGAATAAACTTTGGGTCCGATTACAGCATCAGGGACCCGGTCAGATAAGGGAGAagagggaaaaagaaagaaatgaactCCGCGATCTTGTAGGAAAGAATCTCCATTTATTGAGTCAGATAGAGGGTGTGGACCTTGAAATGTACAAAGACACCGTCCTTCCCAGGGTTTTGGAGCAGGTTGTCAACTGTAAAGATGAGCTTGCCCAATTTTATCTGATGGAGTGCATAATTCAGGTTTTTCCAGATGAGTATCACTTGCAGACTCTTGAGACACTATTAGGGGCTTGCCCCCAACTGCAGCCAACCGTCGACATTAGGACAGTATTATCTCAGTTAATGGAGAGATTGTCAAATTATGCTGCCTCAAGTACCGATGTTTTGCCTGAATTTTTGCAAGTCGAAGCATTCACCAAATTAAGCAGCGCAATAGGCAGGGTTATAGAAGCACAGGTTGACATGCCTATTGTAGGAGCAATAGCTTTGCAAGTGTCTCTTCTTACATTTACTCTCCGCGTTCATCCAGATCGGCTTGACTATGTGGATCAAGTACTGGGAGCATGTGTCAAGAAGCTTTCTGATAAGCCCAAACTTGATGACAAAAGAGCAACAAAACAAGTTGTTGCACTTTTAAGTGCTCCATTGGATAAATACAATGATATAGTTACAGCCTTGACACTTTCTAATTATCCCCGCGTAATGGATCATCTTGATAATGAAACAAATAAAGTCATGGCCATGGTTATTATCCAAAGCGTAATGAAGAATAACACTTGCATCTCTACTGCTGATAAGGTTGAGGTATTGTTTGAATTGATTAAAGGGCTTATCAAGGATTCAGATGGAACAGATCTTGATGAGgtCAAGCTCATTACATGTGACGTTGATGAAGAAGATTTCAATGAAGAACAAAATTCTGTTGCTCGCCTCATACACATGCTTCATAACAATGACCCAGAGGAAATGGTAAAGATTATATGCACCGTGAAGAAACATATTATGAGTGGAGGACCAAGACGCCTTCCTTTCACAGTTCCTTCCCTTGTATTTTCTGCACTTAGGTTGATTAGGCAATTGCAAGGGCAGGATGGAGATGTTGTGGGAGAAGACGTTCCTGCAACAccgaaaaaaatatttcaactcTTAAATgagACCATTGAAGCTCTTTCTTCTGTCCCATCTCCTGAGCTTGCACTTAGACTGTATCTGCAATGTGCTGAGGCTGCTAATGACTGTGACCTTGAGCCTGTCGCCTATGAATTTTTCACTCAGGCGTTTGTATTATATGAGGAAGAAATTGCGGATTCCAAAGCTCAGGTAACTGCAATACATCTAATTATTGGGATGCTTCAGAGGATGAACGTCTTTGGTGTTGAGAACAGGGATACTTTAACACACAAGGCCACAGGGTATTCAGCGAAACTCTTGAAGAAGCCAGATCAGTGCCGGGCAGTTTATGCATGCTCACATCTCTTCTGGGTTGACGATCAAGATGGTATTAAAGATGGAGAACGGGTATTGCTTTGCCTTAAGCGTGCCTTGAGGATTGCGAATGCTGCTCAGCAAATGGCCAATGTGACAAGGGGTAGCAGTGGTCCGGTTACGCTATTTGTTGAAATACTAAACAAATACTTGTACTATTTTGAGAAAGGAAACCCACATATTACAAGTGCTACAATTCAGGGGCTGTTAGAATTAATCAACACTGAGATTCAGAGTCCGACTTCGGATGCTTTCTTTGCCAGCACACTGCGATACATCCAATTCCAGAAACAAAAGGGTGGTATACTGGGTGAGAAATATGATTCTATCAAGGTACATTGGGAAAGGCAATGTACAAGTGCCATgaCTCTCTTGTACAATTTCTTTggttttttctaa 2436 0.4097 MIADGIEDEEKWLAEGIAGIQHNAFYMHRALDANNLREALKYSAHMLSELRTSKLSPHKYYDLYMRAFDELRRLEIFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIRSKEAPVRDVLKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSEYEGDADSVMDSVEFVLQNFTEMNKLWVRLQHQGPGQIREKREKERNELRDLVGKNLHLLSQIEGVDLEMYKDTVLPRVLEQVVNCKDELAQFYLMECIIQVFPDEYHLQTLETLLGACPQLQPTVDIRTVLSQLMERLSNYAASSTDVLPEFLQVEAFTKLSSAIGRVIEAQVDMPIVGAIALQVSLLTFTLRVHPDRLDYVDQVLGACVKKLSDKPKLDDKRATKQVVALLSAPLDKYNDIVTALTLSNYPRVMDHLDNETNKVMAMVIIQSVMKNNTCISTADKVEVLFELIKGLIKDSDGTDLDEVKLITCDVDEEDFNEEQNSVARLIHMLHNNDPEEMVKIICTVKKHIMSGGPRRLPFTVPSLVFSALRLIRQLQGQDGDVVGEDVPATPKKIFQLLNETIEALSSVPSPELALRLYLQCAEAANDCDLEPVAYEFFTQAFVLYEEEIADSKAQVTAIHLIIGMLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVTRGSSGPVTLFVEILNKYLYYFEKGNPHITSATIQGLLELINTEIQSPTSDAFFASTLRYIQFQKQKGGILGEKYDSIKVHWERQCTSAMTLLYNFFGFF 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0121 811 PIRSF Retromer_Vps35 3 802 IPR005378 GO:0015031|GO:0030906|GO:0042147
Sto5g0121 811 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 791 - -
Sto5g0121 811 Pfam Vacuolar protein sorting-associated protein 35 12 754 IPR005378 GO:0015031|GO:0030906|GO:0042147
Sto5g0121 811 PANTHER VACUOLAR SORTING PROTEIN 35 2 791 IPR005378 GO:0015031|GO:0030906|GO:0042147
Sto5g0121 811 Gene3D - 475 776 IPR042491 -
Sto5g0121 811 SUPERFAMILY ARM repeat 123 616 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0121 Sto-Chr5 691901 703274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0121 K18468 - gmx:100775573 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0121 5 691901 703274 Sto5g0121 5 691901 703274 ECH