Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0117 ATGCAACAAGGAGATTACGGCTCCGCTCCATATTATCAATTCCCTCATCTTCAAAACCCTAATATCAACCCTAGCCCTAATATTACCGATCCAATTCCGAATCCGTACGCTTCCGCTCCTCCGTTCACCTCTGATTACACGGCTTACAACTCCGCTTATCCTCCATACCCTCACAATTCCGAGCCAATCTCAGTCCCGGCACCAGCTCCTCCTACTGCTCCATCATACCCGCCAACTTCCAACCCTAATTTGCAGCCATTTCATTCTTCTCCTCAACCCTCATCCTTCCCTCCGTTTGAATCTCATCTTTCATACCAGCCACCATCCCAGCAACAATCTTACTATCCGCCGTATGATCAGCATCAATCAGCTCCAAATTATACCCCCTCCGCCTCCTCTGTTCCTCCAAGCCTAAATCCAAATTCTTCATACTCGTCCTCTTACACGTCTCCATATGGTCAACCTGGATCTTCTATTCCTCCTACATACGAAAGTCCTTATGAGAATTCTGTGAAATTTGATCATGGTGGTGCTTATTTGGATGACAGATATGGAAGTTTTAATCAAAGCCTGTCCAGTTTGGGATCAGATTTGTATGGGAAGCGACAGGATAGTGGGCTTTCGAGATATGATGCTGGTCGCGATGATGTTTATGGAGAGGGCGTCTATGCTTATGAAGGTGGCAAAGTAGAACCATACGGGGCGCGAGGTACGGCTCCTAAATCGTCTAGTTGGTCTGGCTTTGATGATTATGGCAGGTCAATCAGTTTTCCCTCGTCAAAAGAATCCTCCGTGACAAGCAAGATCGCGAAAGCAGTGCCGAAGGCTGATACCCAAGAAGATGTGAGAAGCGGGGTACAGAAATTTCGAGTCAAGCTGTTGGCGGAAAGTGGTGGTCAGAGCACTATGGACGTTCTCTGTCAGATTGGTTTGGATGGAATCAGAATGCTGGATCCAAGCACCAGTCGAACCTTGAGAATATATTCTCTTGAAAACATTACAAGATGTGAGAGATTCGATTCATCTACTTTTGCATTTTGGTCTAAGAGTTCGGTGGACATTGAACCAAAACGAATCAGACTGCAATCCAATAGTTACACTACCAATACACTTTTGGATACTGTGACTGCTGCAACCATACAGTTCAAGGAAATGGGTGGAAGCAGGAGGCCTGCTGAATCATTGAAAATAATTGAACAGTCCACTGAAAAGAAGAAAGGTCTTACTGATTGGATGAATTTGATCAAACCTCCTAATGAAGAGAAAGACCATTGGGTTCCTGATGAAGCCGTCACAAAATGTACGGCATGTGGCACTGATTTTGGGGCATTTGTTCGTAAGCATCACTGTAGGAACTGTGGGGATATTTTCTGTGACAAATGTACTCATGGTAGAATTGCTCTAACTGCTGATGACAATGCTCAGCCAGTACGAGTTTGTGACCGTTGTCTGGCAGAAGTGACTCAGAGGCTCAGTAATGCTAAAGAAGTAGCAAGTAAACCTGTGTTGCAGAGTCATGAGGATCTTGCAAGGAAACTTCAGGAGGAGCTTGAGAGGAACCGGAAGACATCAGGCTCGAAGTCCGATGGATCTGGAAGACGGATGAAGGAAGTTGAATGTCCTATATGCACGGTCCATTTGCAGGTCCAGGTACCTAGCTCTGGTTCAGAGACAATTGAGTGTGGGGTTTGCCAGCACCCATTTCTTGTGAGTGCACATTGA 1722 0.457 MQQGDYGSAPYYQFPHLQNPNINPSPNITDPIPNPYASAPPFTSDYTAYNSAYPPYPHNSEPISVPAPAPPTAPSYPPTSNPNLQPFHSSPQPSSFPPFESHLSYQPPSQQQSYYPPYDQHQSAPNYTPSASSVPPSLNPNSSYSSSYTSPYGQPGSSIPPTYESPYENSVKFDHGGAYLDDRYGSFNQSLSSLGSDLYGKRQDSGLSRYDAGRDDVYGEGVYAYEGGKVEPYGARGTAPKSSSWSGFDDYGRSISFPSSKESSVTSKIAKAVPKADTQEDVRSGVQKFRVKLLAESGGQSTMDVLCQIGLDGIRMLDPSTSRTLRIYSLENITRCERFDSSTFAFWSKSSVDIEPKRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPAESLKIIEQSTEKKKGLTDWMNLIKPPNEEKDHWVPDEAVTKCTACGTDFGAFVRKHHCRNCGDIFCDKCTHGRIALTADDNAQPVRVCDRCLAEVTQRLSNAKEVASKPVLQSHEDLARKLQEELERNRKTSGSKSDGSGRRMKEVECPICTVHLQVQVPSSGSETIECGVCQHPFLVSAH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0117 573 CDD FYVE_EEA1 425 487 - -
Sto5g0117 573 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 428 488 IPR017455 -
Sto5g0117 573 SUPERFAMILY FYVE/PHD zinc finger 423 497 IPR011011 -
Sto5g0117 573 MobiDBLite consensus disorder prediction 40 54 - -
Sto5g0117 573 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 415 493 IPR013083 -
Sto5g0117 573 PANTHER PROTEIN FREE1 1 573 - -
Sto5g0117 573 SMART fyve_4 420 489 IPR000306 GO:0046872
Sto5g0117 573 MobiDBLite consensus disorder prediction 1 172 - -
Sto5g0117 573 Pfam FYVE zinc finger 424 488 IPR000306 GO:0046872
Sto5g0117 573 PANTHER PROTEIN FREE1 1 573 IPR045893 GO:0036258|GO:0043130
Sto5g0117 573 Coils Coil 503 523 - -
Sto5g0117 573 MobiDBLite consensus disorder prediction 82 165 - -
Sto5g0117 573 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0117 Sto-Chr5 676440 681313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0117 416 501 EF-hand Containing Proteins AT3G14270 32.990 9.04e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0117 - - vvi:100259195 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0117 5 676440 681313 Sto5g0117 5 676440 681313 ECH