Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0111 ATGTCGTGGAGCGAGAAAAGTGAGAAGATAACGCTTTTGAGCTCTGATAATGAGGCTTTCGAGGTAGATATTTCTGTTGCTATGCAATCACAAACACTCAAGTACATGATCGAGGACGGTTGCACCGAAAATGGAATTCCATTGCCGAATGTGAATTCCAAAATCTTGTCCAAGATTATTGAGTATTGTAACAAACACAAATCCCATCATCATCCTTCCAATACGGACGACGAGCTTACCAAGTGGGACTCTCACTTTCTTAAAGTCGATCAAGAAACTCTCTTTGATATTATCTTGGCTTCTAACTATTTGAACATCAAGAATCTACTTGACCTAACTTGTGAAACAGTGGCAAATATGATCAAAGGCAAAACTCCTGAAGAAATTCGCAAAACATTTAACATCAAGAATGACTTTACTcctgaagaagaggaagaagttcGTCGAGAAAATCAATGGGCCTTTGAATGa 471 0.3652 MSWSEKSEKITLLSSDNEAFEVDISVAMQSQTLKYMIEDGCTENGIPLPNVNSKILSKIIEYCNKHKSHHHPSNTDDELTKWDSHFLKVDQETLFDIILASNYLNIKNLLDLTCETVANMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0111 156 PANTHER SKP1 5 156 IPR016897 GO:0006511
Sto5g0111 156 SUPERFAMILY POZ domain 9 70 IPR011333 -
Sto5g0111 156 SMART skp1_3 7 106 IPR001232 GO:0006511
Sto5g0111 156 PIRSF SCF_Skp 1 156 IPR016897 GO:0006511
Sto5g0111 156 Pfam Skp1 family, tetramerisation domain 9 67 IPR016073 GO:0006511
Sto5g0111 156 Gene3D Potassium Channel Kv1.1; Chain A 3 156 IPR011333 -
Sto5g0111 156 CDD BTB_POZ_SKP1 9 121 - -
Sto5g0111 156 SUPERFAMILY Skp1 dimerisation domain-like 79 154 IPR036296 GO:0006511
Sto5g0111 156 Pfam Skp1 family, dimerisation domain 107 154 IPR016072 GO:0006511
Sto5g0111 156 PANTHER PUTATIVE-RELATED 5 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0111 Sto-Chr5 644401 645028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0111 K03094 - rcu:8274703 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0111 5 644401 645028 Sto5g0111 5 644401 645028 ECH