Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0079 ATGAGTGTAGGGTGGAATGAACTCCCACCAGAAATCATACAAACAATCTGTGCAAAGTTGATTAACTATGCTGATTACATCCGATTCCGATGTGTTTGCAAGATTTGGCGGTCTTCTGTTCCTCAAACTCCTCACAATCTTCCTCCCCAACTCCCATGGCTCATGCTTCCTCTTTCTCACTCTTCAACCCACCAATCTCGCCGAGCCTTCTTCAATCTCTCAAACCACAAAACCCTCTTCCTTCACCTCCCTCACGCCTCTCATCCCAGGCGTTGCTGCGGTTCTTCTCACGGATGGCTTGTTCTTCTTGATGACACACCTGAGATTCTTCTCCTCAATCCTCTTGCAGGAGCcaatcttcatcttcctccGCTTCACACTTTCCCCAATGTTGTCAGCTTCAGTTTTTCTAATATCGGTAGAGAATATGTTTTAAGAAATTCACATGGTCATCTGTACACGCGTAATCTCAGGCAGATGCGCAATTCTTTTTTGAGAAAGGTTGTATTGTCATCTACCCCTTCACAAACCAACCAATTCATGGCTTTGGCTATCCTTGGTCACACTAATTTGGCCTTCTGCAAACATGGTGATGATTCTTGGACATTCATAGATAAAGCACATAACTGTTGGGAAGATGTGGTATTTCACAATGGGAAATTTTATGCGGTGAAAAAAGGAGGAACGCTTGCAGTGCTAGATATTCAAGATCGTTTTTCACCCAGACTTGAGATTATTGAAATGACAGGACAATTTCAAGGTGATATGCAATATTTGGTGTTTTCAAGGAATGAATTACTGTTCGTTGCTCGGTATCTAGAACTTGAGTTCAATGAAACAGAGAATGGTTCGAATTTAGTGTACAAGACAGTTGGTTTCAATGTTTCCAAGATGAATTGGAGTGCCTCCCAATGGCAGAAATTAGATAGTTTGGGTGATCAAATGTTGTTCTTAGGAGACAATTCTTCACTCTCTTTGTGTGCTTCTGATTTTCCGCGATGTTTTGGGGATTGTATCTATTACACTGATGATTATTCAGAGTCTAATTTTGATGGTGCATATGGAAGATATGATTTAGGCATCTACAAATTATGGGATCGAAGCATTGATCCCTTACCTTGTTATCCACCAAATGTGAAGTCACGTTTAGGTTGCacacaatttttaaatatacaAGCTGAAGTGAGTGCCATGAGCCATGAAATTGAGTTGAAGTATGGGCAGAGATATGAGGAAGGCCTTGCAGTTACAGATTGA 1257 0.4033 MSVGWNELPPEIIQTICAKLINYADYIRFRCVCKIWRSSVPQTPHNLPPQLPWLMLPLSHSSTHQSRRAFFNLSNHKTLFLHLPHASHPRRCCGSSHGWLVLLDDTPEILLLNPLAGANLHLPPLHTFPNVVSFSFSNIGREYVLRNSHGHLYTRNLRQMRNSFLRKVVLSSTPSQTNQFMALAILGHTNLAFCKHGDDSWTFIDKAHNCWEDVVFHNGKFYAVKKGGTLAVLDIQDRFSPRLEIIEMTGQFQGDMQYLVFSRNELLFVARYLELEFNETENGSNLVYKTVGFNVSKMNWSASQWQKLDSLGDQMLFLGDNSSLSLCASDFPRCFGDCIYYTDDYSESNFDGAYGRYDLGIYKLWDRSIDPLPCYPPNVKSRLGCTQFLNIQAEVSAMSHEIELKYGQRYEEGLAVTD 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0079 418 PANTHER OS07G0183000 PROTEIN-RELATED 3 385 - -
Sto5g0079 418 PANTHER F-BOX PROTEIN SKIP23-LIKE 3 385 - -
Sto5g0079 418 Gene3D - 4 45 - -
Sto5g0079 418 Pfam Protein of unknown function (DUF295) 307 363 IPR005174 -
Sto5g0079 418 SUPERFAMILY F-box domain 4 40 IPR036047 GO:0005515
Sto5g0079 418 SUPERFAMILY Calcium-dependent phosphotriesterase 70 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0079 Sto-Chr5 501814 505192 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0079 - - pvy:116119002 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0079 5 501814 505192 Sto5g0079 5 501814 505192 ECH