Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0060 ATGGATGCGCCCAACACCAGATTTAAAAGGGTTTGTGTCTTCTGCGGAAGCACTACTGGCAACAGAAATTGCTATAAGCAAGCTGCTCTTCAACTTGCCCAAGAGCTGATATCGAGGAGGCTGGATCTTGTTTATGGGGGAGCAAGTGTTGGACTAATGGGTGTGGTTTCCCAAGAGGTTCATCGGGGTGGAGGATACGTTTTAGGAATCATTCCCAAAAGTCTCATGCGAGAAGAGATAACTGGGGAAACGGTGGGGGAGGTGAGGGCTGTGGCCGACATGCATGAAAGAAAAGCGGAGATGGCACGCCATTCTGACTGTTTCATTGCTCTTCCAGGTGGGTACGGAACCTTGGAAGAGTTACTGGAAGTCACTACATGGGCCCAGCTTGGAATACACGACAAACCTGTGGGTTTGCTGAATGTAGAGGGATACTACAACAACCTTCTCACCTTCATAGACAAAGCAGTGGAGGATGGGTTTGTTGAGCCATCTCAGCGCAATATTATTGTCACTGCTCCAAACGCTAAGCAACTTGTTCAGAAATTAGAGGAATACGTGCCTATACACCATGGAATCGTGGCTAAGGCCACATGGGAGGCGGAGCAAGTGGAGCTCAACGCCTCTATGCACAAACACATGGCTCGCTATTGA 654 0.4893 MDAPNTRFKRVCVFCGSTTGNRNCYKQAALQLAQELISRRLDLVYGGASVGLMGVVSQEVHRGGGYVLGIIPKSLMREEITGETVGEVRAVADMHERKAEMARHSDCFIALPGGYGTLEELLEVTTWAQLGIHDKPVGLLNVEGYYNNLLTFIDKAVEDGFVEPSQRNIIVTAPNAKQLVQKLEEYVPIHHGIVAKATWEAEQVELNASMHKHMARY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0060 217 Pfam Possible lysine decarboxylase 53 183 IPR031100 -
Sto5g0060 217 SUPERFAMILY MCP/YpsA-like 7 186 - -
Sto5g0060 217 TIGRFAM TIGR00730: TIGR00730 family protein 9 186 IPR005269 GO:0009691|GO:0016787
Sto5g0060 217 Gene3D - 2 185 - -
Sto5g0060 217 PANTHER LOG FAMILY PROTEIN YJL055W 4 216 - -
Sto5g0060 217 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0060 Sto-Chr5 391153 392590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0060 K22522 - tcc:18591670 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0060 5 391153 392590 Sto5g0060 5 391153 392590 ECH