Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0039 TTGAATTCTCATCACCACTATTCTACATTATCGCCATGTAATTCGGTTCCGTACGGCGCTGACTGGAACGACGATCCTCAGTCTATCCCCAAGAGACGCAAGATTAATGTTGCCCATCACGGATCGGATGAAACGAATGAAAAGGTTCCGAAAGCGACAGACAGTAAACATGGTTCGCAGAGAGAGTCCGGTCCCACTACGCCTTTGCCAGACAAAAAGCTCTTGGTGTTTATACTTGATAGGCTTCAAAAGAAAGATACCCATGGAGTGTTCTCAGAACCTGTGGATCCAGAGGAGCTTCCTGATTATCATGATATCATTGAACACCCAATGGATTTTGCAACGGTGAGGAAGAAGTTGGATGGGGAACGTTATACCAACTTAGAACAATTTGAGGTTGGTTGTTcagttAAAGATGTGTTCTTGATATGCTCAAATGCAATGCAATATAACGCAGCAGATACTATTTACTATCGGCAGGCTCGAGCCATGCAAGAGATGGCTAGAAAAGACTTTTCCAATCTTAGGCAGGATAGTGATGATAGTGAACCGCAACCCAAAATTGTGCGGAGAGGCAGGCCACCAGGAAAGAACTCAAGAAAGTCATTGGGCACGTCTCCATCTGAGCGCATTGGTCCTGAGTCTTCCTCAGATGCAACACTCGCGTCTGGAGGAGATAATGCCAGTGCCTCCAACAATTATAATCTAAGAAAAGGAATAAGCAAGCTCCAGCCTGCTGAATCATTAGTCAAGGCTTCCCCCAGCAACTTAAACAGTGGGGGATATACTACTTGGCCGTCTGAATGGGAGAATGAATTTCCAGCTTCTGTTTTAAAAGCTGTATTGCGGTATGGAAAGAAGCAATTCATGGTTGATGAGACCAGACGTGACACTTATTACAAGCCCCCAGTGGCTTCTGGGAATGAACCTCCAATGCTTGATACAGTTGAAGAAGAATTCAAACAATTAATTGCGGTAGGTTTAAATGTGAAGCATAGCTATGCAAGAAGCCTAGCCTGTTTTGCTGCAGATCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGGAAAATCAGGAGTGTTTTGCCAGTAGGACATGGATTTGGTCCTGGATGGGTGGGAGAAGACGAGGTCTCACAGAGGCAACACTACTCAGTTTATGATGAGGAGAGATCTTTAGACTCTTCTTCTATACCAGAGGATTATTCAAGTAGATTTCCTCCTTCTCCATCTGGTTCTCTTCCTGTTGCAAATAAATCATGCTTGCAAGGTGGAGACATGATATTAAACAGAGGATTGAATTCCCAAAGTGAGATGAATTCATTTAACAGTGTTGGTAGTGGGATTGAATCAATGGTTCCCTTGAGGATTCAGCAGGAATCTGTGGTTCACTCTGATAATTTATTTGGTTCAAATGGTCGGTTAGGTCCCAAATTTTCACCTCAAATGAGGATGGTAAAGCTTGCCGACTTAACCGGGTTTCCCAGTTCTGGTGATGGTCCTCAAATGATTGACAAGGATTCAACGAGCAACTTGACCACCTGCATGAGGCCTTCAAATATAAATTCTCCTGTCAAATCCCAAATCTCAAGCGATTTTGGCCAATCAGATTCCTGTAATTTATTGGCCCAGGAATCTGGCTTTGAGTTTCAAAGAGGGCATACTGTTAAATCGTCTTGGCAGGAATTGGCAGTTCCTGTGAAACACAATTCTTTGTCATTTGGTAAGGACTTGAATGGGAGGATTGAAGCAACCAATTCACCTAGTTCCAGTGTGGATACGGGTACTCAGCTGCAGCCAAATTTGTCCCTGCAGCTTTGA 1818 0.4367 LNSHHHYSTLSPCNSVPYGADWNDDPQSIPKRRKINVAHHGSDETNEKVPKATDSKHGSQRESGPTTPLPDKKLLVFILDRLQKKDTHGVFSEPVDPEELPDYHDIIEHPMDFATVRKKLDGERYTNLEQFEVGCSVKDVFLICSNAMQYNAADTIYYRQARAMQEMARKDFSNLRQDSDDSEPQPKIVRRGRPPGKNSRKSLGTSPSERIGPESSSDATLASGGDNASASNNYNLRKGISKLQPAESLVKASPSNLNSGGYTTWPSEWENEFPASVLKAVLRYGKKQFMVDETRRDTYYKPPVASGNEPPMLDTVEEEFKQLIAVGLNVKHSYARSLACFAADLGPVVWKIAARKIRSVLPVGHGFGPGWVGEDEVSQRQHYSVYDEERSLDSSSIPEDYSSRFPPSPSGSLPVANKSCLQGGDMILNRGLNSQSEMNSFNSVGSGIESMVPLRIQQESVVHSDNLFGSNGRLGPKFSPQMRMVKLADLTGFPSSGDGPQMIDKDSTSNLTTCMRPSNINSPVKSQISSDFGQSDSCNLLAQESGFEFQRGHTVKSSWQELAVPVKHNSLSFGKDLNGRIEATNSPSSSVDTGTQLQPNLSLQL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0039 605 MobiDBLite consensus disorder prediction 579 605 - -
Sto5g0039 605 MobiDBLite consensus disorder prediction 389 412 - -
Sto5g0039 605 MobiDBLite consensus disorder prediction 26 58 - -
Sto5g0039 605 PANTHER BROMODOMAIN-CONTAINING PROTEIN 9-LIKE 26 605 - -
Sto5g0039 605 ProSiteProfiles Bromodomain profile. 83 158 IPR001487 GO:0005515
Sto5g0039 605 PRINTS Bromodomain signature 139 158 IPR001487 GO:0005515
Sto5g0039 605 PRINTS Bromodomain signature 116 134 IPR001487 GO:0005515
Sto5g0039 605 PRINTS Bromodomain signature 100 116 IPR001487 GO:0005515
Sto5g0039 605 PRINTS Bromodomain signature 86 99 IPR001487 GO:0005515
Sto5g0039 605 MobiDBLite consensus disorder prediction 1 16 - -
Sto5g0039 605 MobiDBLite consensus disorder prediction 199 233 - -
Sto5g0039 605 Gene3D - 69 190 IPR036427 GO:0005515
Sto5g0039 605 MobiDBLite consensus disorder prediction 1 70 - -
Sto5g0039 605 MobiDBLite consensus disorder prediction 578 605 - -
Sto5g0039 605 MobiDBLite consensus disorder prediction 172 233 - -
Sto5g0039 605 SMART bromo_6 64 177 IPR001487 GO:0005515
Sto5g0039 605 MobiDBLite consensus disorder prediction 396 412 - -
Sto5g0039 605 SUPERFAMILY Bromodomain 52 180 IPR036427 GO:0005515
Sto5g0039 605 PANTHER BROMODOMAIN CONTAINING PROTEIN 26 605 - -
Sto5g0039 605 Pfam Bromodomain 78 162 IPR001487 GO:0005515
Sto5g0039 605 MobiDBLite consensus disorder prediction 172 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0039 Sto-Chr5 243557 247676 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0039 K22184 - gmx:100811115 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0039 5 243557 247676 Sto5g0039 5 243557 247676 ECH