Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0020 ATGGCGTCCATTTCGGGGTTCAGTTGTTGGTATAGGCGACCTTCCCTCTGCCACTTGAGAGCCTGTTCGGAGGAGAAAGCTCTATTCTATTACAAGGCTATCCACCAAGATCAAATCCAAACCCCAGATTCATTTTCCTCCGTCCAGCATCCCTATGCTAACAGAAGACAACTGATTCTTCACTCCGCACTCACTGCCTTTACATTTCCACTCAACGCCATTGCCGTGTCGGATTCAGAAGGACAAGCTCGTAGTCGTATCTACACTGATGACATTAACAAGTTCCAGATAGTCATTCCTCAAGAATGGCAAGTAGGAACAGGAGAGCCAAATGGGTTTAAATCGGTAACCGCTTTCTACCCAGAAGAGGAATCAAGTTCCAATGTGAGTGTAGTGATCACGGGGCTGGGTCCGGATTTTACTAGGATGGAATCGTTTGGAAAAGTGGAAGAATTTGCTGACACTCTGGTCAGTGGGCTGGACAGAAGCTGGCAGAGACCACCGGGTGTAGCTGCTAAACTCATAGATTGTAAAGCTGCTAATGGCTTCTATTACATCGAATATTCCCTACAAAACCCTGGTGACACTCGCAGACATCTCTATTCAGCTATCGGGATGGCTTCAAATGGTTGGTATAACAGACTCTATACGGTCACGGGACAGAAACCTATTCCAGCACCCACTGATCCAACACCACTGCCACTCGACCTGAGTGCTAGTAGTACAAGGGGAAATGGGGAATCACTAACTACAGTATCTGTAGAGTACAAAGACCATAGCAATGCTGCCTGTTGTGATTGGTACATTGAGATTGACACAGAGAAGAAAAGGGTTAAACTAGTTGCAAGAATATGCGCCCAGCAGACCTTAGACAACATTAAACAGTTAACCCTGCATACTAATGAAGGACAACGCAGAGGAGGCCGTGGTCTCCCAAGTGAAGCCAAGTTACAATTTGCTCTCCTACCATCAATCACTGGAGTTGGATCGGCACATGCTCTCCTAGCAGCCTCAGGATCACGGAAAGTCACCTATACCCTCCATGCAAGTCAGAACAGAAACCAAGTCATTCTAAGggtTGTCTATTGTAATTACTTGGGTAACTTTTGTAATTTACGCACATTTTACAATCTTTTCCCGTTCCCATCCTCTTTTTATGGGAAATCGGGTCACATGTTCATGAAGACATGGGCTTATCTATGCCAAACCCAACTAGAAACCAAATCTTCATCGTCTTTAATACAGAAACCAGAGCCGTTCTTTGGGAGGGAAGCCATTGCTGATCTAAATTCTGCAAATCTTGACACTGCGTACACAAATCTTTGGCTTCAAATGGACCCTACTCTCAATGAGAATAACAAGCCAAGCTTGAAAATTTCGGACCACATGTTCCAACCAATTCTGGACCAATCCATTCGAGCCACGTTGGAGCTGAGACGTGGAGATTTAGACAAGATAAAGACAAGAATTTTAGAaaagggggaggaggaggaggaggaggagaatcAGAATCCACCGCGTTTATCAACCTTCGTGCTTACAACTGCTTATGTTTCGTCATGTGTTGTTAAAGCTTTCGAAAGAActgaaatgaaaagagaaacctTTGTGTTTGGTTTCCCTGTGGATTGCAGGGGAAGGTTAGGAGCTTCGGAGGTGCCTGAAAACTATTTTGGGAACTGTGTGGTTCCTCGTTTTAGTGAAGAATTTAGTGAGAGGACGGGAACGGAGAAGATTGTAAAATGTGcgtaa 1752 0.4315 MASISGFSCWYRRPSLCHLRACSEEKALFYYKAIHQDQIQTPDSFSSVQHPYANRRQLILHSALTAFTFPLNAIAVSDSEGQARSRIYTDDINKFQIVIPQEWQVGTGEPNGFKSVTAFYPEEESSSNVSVVITGLGPDFTRMESFGKVEEFADTLVSGLDRSWQRPPGVAAKLIDCKAANGFYYIEYSLQNPGDTRRHLYSAIGMASNGWYNRLYTVTGQKPIPAPTDPTPLPLDLSASSTRGNGESLTTVSVEYKDHSNAACCDWYIEIDTEKKRVKLVARICAQQTLDNIKQLTLHTNEGQRRGGRGLPSEAKLQFALLPSITGVGSAHALLAASGSRKVTYTLHASQNRNQVILRVVYCNYLGNFCNLRTFYNLFPFPSSFYGKSGHMFMKTWAYLCQTQLETKSSSSLIQKPEPFFGREAIADLNSANLDTAYTNLWLQMDPTLNENNKPSLKISDHMFQPILDQSIRATLELRRGDLDKIKTRILEKGEEEEEEENQNPPRLSTFVLTTAYVSSCVVKAFERTEMKRETFVFGFPVDCRGRLGASEVPENYFGNCVVPRFSEEFSERTGTEKIVKCA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0020 583 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 73 225 - -
Sto5g0020 583 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 41 221 - -
Sto5g0020 583 Pfam PsbP 86 223 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Sto5g0020 583 Gene3D - 469 583 IPR023213 -
Sto5g0020 583 PANTHER - 41 221 - -
Sto5g0020 583 Pfam Transferase family 387 568 - -
Sto5g0020 583 Coils Coil 483 503 - -
Sto5g0020 583 SUPERFAMILY Mog1p/PsbP-like 87 221 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0020 Sto-Chr5 145415 154794 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0020 - - gmx:100785276 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0020 5 145415 154794 Sto5g0020 5 145415 154794 ECH