Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0004 TTGCAGGAGTCCTTAGATGCCCAACCAGATGACGCCTCGCTTCATTTTGATATGGGCGTGTTTTTGTGGGACAAAGGAGGAGAAGCGAAGGAACCCAAGGAAAAAGCTGCTGAACATTTTGTGATATCGGCCAAATTGAACCCTAAGAATGGAGACGCTTTCAAATTTCTGGGCCATTACTATGGCTGCGTTGCCCGTGATACTCAGAGAGCCATTAAGTGTTACCAAAGAGCTATTACACTTAATCCCGATGATTCTGATTCTGGGGAAGCTCTGTGCGATTTGCTTGACGAAGGAGGAAAAGAGAGTTTGGAGGTGGCAGTATGCCACGAAGCTTCTGAAAGGTCACCAAGGGCTTTCTGGGCTTTCCGCAGACTGGGTTACCTGCAGGTCCATCGAAAGAAATGGACTGATGCTGTACAGAGTCTTCAACATGCCATAAGAGGCTATCCTACATGTGCTGATTTGTGGGAAgcTTTGGGCCTTGCTTATCAGCGATTGGGCAGGTTTACTGCAGCTTTAAAGTCTTATGGTCGTGCCATTGAATTGGATCATTCTCTAGTCTTTGCTTTGGTTGAAAGTGGAAATATATCTTTGACACTTGCTGCATCTAAAAAGGGAGTTGATCACTTTCGACTAGCCCTAGAGATCTCGCCCTGTTGTGTGTCTGCACACTATGGACTTGCTTTTGGGCTCCTTGGTTTTGCAAAAGAGTGCATTAATCGAGGAGCATATCAGTGGGGAGCTTCATTATTAGAGGAGGCATCTGAGGTTGCAAGAGCAAGTGCTTATGTTGTTAAAAATATCTCAAGTATTTGGAAACTGCATGCTGATATTCAGCTTGCATATGCAAGATGTTATCCTTGGAATGCTGAGGTCCAAGTATTGGTATCTGATAAGGAAGCTTTCAAGGCTTCCATCCTTTCATGGAGGAAGACATGTCTTTTGGCTGCAAGATGCGCAAGATTCTCATATCAACGGGCCTTGCACTTGGCCCCATGGCAACCTAACATCTATGCGGACATTGCAGTAACTTCAGATCTTATCACCTCATTAGAAAATAACTACAAACAAGACTCAAATGCAAGGAAACTATCAGAGAAGATGTCTATGGGAGCCTTGCTACTTGAAGGTGACAATTATGAGTTTTGGGTGGCATTGGGATACTTGTCTGGTCATAATGCACTAAAGCAACATGCTTTAATAAGAGGATTGCAATTGAATGTATCTTTGGCTATTGCTTGGGGATATCTTGGTAAGCTTTATAGGAAAGAGGGTGAAAAGATTTTGGCAAGGCAAGTGTTTGATCGTGCTAGAAGTATTGATCCTGGCCTTGCATTGCCATGGGCAAGCATGTCAGCTGAGTGTCACTCAAGGGAGCTTGCACCAGTTGAGGCATTTGAGAGCTGTCTACGAGCTGTACAGATAATGCCTTTAGCTGAATTCCAGATTGGCCTCACTAAGCTTGCTTTGCGCACTGGCGATCTTTCATCTTCACAGGTCTACGGAGCTATTAAGCAGGCTGTGCAGCGCTCACCTCAATATCCTGAATCTCATAATTTAAATGGGCTGGTGTTTGAAGCTCGAAAAGATTATCTGTCTGCAGCTGCTTCTTATAGATTTGCACGCCATGCAATTGACATTAGCTCACAGAATTTTCCCAACACACAGATTAGGGATGTATCAATTAATTTGGCGAGGTCACTTTCTAAGGCAGGGAGTGCAGTTGATGCCTTGCAAGAATGTGAACATTTGAAGAAAGAAGGGGCTCTTGACATAGAAGGTTTGCAAGTATATGCTTTCTCCTTGTGGCAACATGGTGAAAATGATTTGGCCCTTTCTGTAGCTAGAAGTCTTGCTGCAAGTCTTTCTTCTATGGAAAAGACTAGTGTGGCAACATCCATTTGTTTCATCTGTAGATTACTATACTACATATGTGGGCTGGATGCAGTGACCAATAACATTGTCAAAATGCCTAAAGAGTTATTTCAAAGCTCAGAAGTTAGTTTTGTACTGTCAGCTATTCATGCTCTTAATGGACATAACCATCTTGGATCTGTTGTTTCAAGTAGCCGATCTTTTCTCACATCTCATGAAGAAATTACCAGGATGCACTTTTTAATTGCGCTTGGTAAACTGGTGAAGAATGGGTCTGAATGCTGCCTTGGAATTCAGAGTGGAGTTGCGCACCTCAGAAAAGCTCTGCACATGTACCCAAGCAGTAATTTGATGAGGAACCTGCTTGGCTATCTCTTGCTATCTTGTAAAGAGTTGAACAGTTGTCACTTAGCAGTAAGGTGTTGCAAATTGGACCCTCCTGACCTGTCAAATCAAGAAGATTTAAAATCAGCATCTGATATTCATGGTGCTGGATCAGTTTCTTGCTATGCCATTGGCAACAGCAATCCGAAGCTTACTTTCCCAACATGTACAAAGCAGTGTCGCACTAATCCTGATTCTATCAGATACCTGCAGAAATGCCTTCATCAAAATCCATGGAATCACAATGCTCGATACTTGCTTGTTCTTAACTTTCTTCAGAAGGCACGTGAAGAGAAATTCCCTCATCATCTTTGTGTTACAATTAATCGGCTAATATTTTTGGCTCTTTCAAATGAATTACATTACAAGATAGAAGTGTCTTACCAATATCAACAATTCCAACTTCTACTTTGTGCTTCTGAGATCAGTTTACAATGTGGGAACCGAAGTACCTGTATCACCTATGCCAAAAAGGCTGCGGCGATTGTACTGCCAGATGACTATTTGTTTTTTGCGCATCTACTGTTGTGTCGTGCTCATGCCATGAAAGGTGATCTTCTAAATCTCCAGGAGGAGTATACAAGGTGCTTGGAGCTCAGAACAGATTGTCATATTGGTTGGATCTGTCTCAAACTAGTGGAATCTCAATATCAGCTGCAAATCAATTCAAATGCTATAGACTTAAACTTTGAACGAAGTGTTAAAAAGGGAGGAAATTTATGGAAAATGTGGATGGCTGTATATAACCTGGTGAGAGGTTTAATTTCCTTGCAGAATAGGGATTTACTCTCAGCAGAAGAGCTTATGGCACAGGCTTGTTCTTTGGCGGATTCTGAAAGCTGCCTCCATTTATGTCATGGTGCCATCTGTATGGAGCTTGGCAGGCAGTGCCATGGTTCTCTGTTTTTATCACGGGCTGCAAATAGCCTCTCTAAAGTTCATGAACATTCAATGATTCCCTTGCCTCTTGCCAGAATCCTGCTGGCTCAAGCAGAAGGAAGCCTTGGTTCTAAGGAGAAATGGGCCACAAACCTTCGCCTCGAATGGTATTCTTGGCCACCAGAACAGAGACCTGCGGAGCTCTCTTTTCTAATCCATTTGGTTGCAAGACAGTTGAAGGCTGGCTCTAATTCTCAATCCACCGTAGTGTTCTCTACGAGTCCTCGAAGATGGGTTCTCCAGGCAATTCACATTAACCCATCTTCTATGAGATATTGGAGGGTTTTACTGAAGCTTTTGGAATGA 3507 0.4286 LQESLDAQPDDASLHFDMGVFLWDKGGEAKEPKEKAAEHFVISAKLNPKNGDAFKFLGHYYGCVARDTQRAIKCYQRAITLNPDDSDSGEALCDLLDEGGKESLEVAVCHEASERSPRAFWAFRRLGYLQVHRKKWTDAVQSLQHAIRGYPTCADLWEALGLAYQRLGRFTAALKSYGRAIELDHSLVFALVESGNISLTLAASKKGVDHFRLALEISPCCVSAHYGLAFGLLGFAKECINRGAYQWGASLLEEASEVARASAYVVKNISSIWKLHADIQLAYARCYPWNAEVQVLVSDKEAFKASILSWRKTCLLAARCARFSYQRALHLAPWQPNIYADIAVTSDLITSLENNYKQDSNARKLSEKMSMGALLLEGDNYEFWVALGYLSGHNALKQHALIRGLQLNVSLAIAWGYLGKLYRKEGEKILARQVFDRARSIDPGLALPWASMSAECHSRELAPVEAFESCLRAVQIMPLAEFQIGLTKLALRTGDLSSSQVYGAIKQAVQRSPQYPESHNLNGLVFEARKDYLSAAASYRFARHAIDISSQNFPNTQIRDVSINLARSLSKAGSAVDALQECEHLKKEGALDIEGLQVYAFSLWQHGENDLALSVARSLAASLSSMEKTSVATSICFICRLLYYICGLDAVTNNIVKMPKELFQSSEVSFVLSAIHALNGHNHLGSVVSSSRSFLTSHEEITRMHFLIALGKLVKNGSECCLGIQSGVAHLRKALHMYPSSNLMRNLLGYLLLSCKELNSCHLAVRCCKLDPPDLSNQEDLKSASDIHGAGSVSCYAIGNSNPKLTFPTCTKQCRTNPDSIRYLQKCLHQNPWNHNARYLLVLNFLQKAREEKFPHHLCVTINRLIFLALSNELHYKIEVSYQYQQFQLLLCASEISLQCGNRSTCITYAKKAAAIVLPDDYLFFAHLLLCRAHAMKGDLLNLQEEYTRCLELRTDCHIGWICLKLVESQYQLQINSNAIDLNFERSVKKGGNLWKMWMAVYNLVRGLISLQNRDLLSAEELMAQACSLADSESCLHLCHGAICMELGRQCHGSLFLSRAANSLSKVHEHSMIPLPLARILLAQAEGSLGSKEKWATNLRLEWYSWPPEQRPAELSFLIHLVARQLKAGSNSQSTVVFSTSPRRWVLQAIHINPSSMRYWRVLLKLLE 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0004 1168 SMART tpr_5 120 153 IPR019734 GO:0005515
Sto5g0004 1168 SMART tpr_5 154 187 IPR019734 GO:0005515
Sto5g0004 1168 SMART tpr_5 412 445 IPR019734 GO:0005515
Sto5g0004 1168 SMART tpr_5 51 85 IPR019734 GO:0005515
Sto5g0004 1168 PANTHER SUPERKILLER 3 PROTEIN-RELATED 1 854 IPR039226 GO:0006401|GO:0055087
Sto5g0004 1168 ProSiteProfiles TPR repeat profile. 154 187 IPR019734 GO:0005515
Sto5g0004 1168 SUPERFAMILY TPR-like 504 850 IPR011990 GO:0005515
Sto5g0004 1168 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 37 1 854 - -
Sto5g0004 1168 SUPERFAMILY TPR-like 2 95 IPR011990 GO:0005515
Sto5g0004 1168 SUPERFAMILY TPR-like 117 543 IPR011990 GO:0005515
Sto5g0004 1168 Gene3D Tetratricopeptide repeat domain 706 1100 IPR011990 GO:0005515
Sto5g0004 1168 ProSiteProfiles TPR repeat profile. 412 445 IPR019734 GO:0005515
Sto5g0004 1168 ProSiteProfiles TPR repeat region circular profile. 154 184 - -
Sto5g0004 1168 Pfam Tetratricopeptide repeat 154 184 IPR013105 -
Sto5g0004 1168 ProSiteProfiles Rhodanese domain profile. 88 145 IPR001763 -
Sto5g0004 1168 Gene3D Tetratricopeptide repeat domain 1 287 IPR011990 GO:0005515
Sto5g0004 1168 Gene3D Tetratricopeptide repeat domain 317 630 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0004 35 229 Glycosyltransferase AT3G04240 22.034 3.40e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0004 K12600 - gmx:100779830 1755.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0004 5 43990 67369 Sto5g0004 5 43990 67369 ECH