Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2917 ATGGGTGACGCTACCAATACACTTCGTGTACTCGTAGCTACGGACTGCCACCTCGGCTACATGGAGAAGGACGAAATACGTCGCCACGACTCATTCCAAGCATTTGAAGAAATTTGCTCTATAGCTGAACAGAAGCAGgttgattttttattacttGGTGGTGATCTTTTCCACGAGAATAAGCCATCCAGATCAACATTAGTTAAGGCTATTGAGATTCTCCGTCGATATTGTCTCAATGATCGGTCAGTGCAGTTCCAAGTTGTCAGCGACCAGACTGTTAATTTTCAGAATGCATTTGGTCATGTAAATTATGAAGATCCTCACTTCAATGTTGGGTTGCCAGTTTTCAGCATTCATGGAAATCATGATGATCCAGCAGGCGTGGACAACCTTTCTGCAGTTGATATTCTCTCAGCGTGTAATCTAGTCAACTACTTTGGGAAAACAGTTCTTGGGGGTTCTGGTGTTGGACAGATTACCGTCTACCCAATTCTTATTAAGAAGTTGCAGGGTTCAACAGCTGTAGCTCTGTATGGTCTGGGGAACATTAGGGATGAAAGGCTCAATAGGATGTTTCAAACACCACATGCTGTGCAGTGGATGCGGCCTGAATCTCAGGAAGGGTGTGAGGTGTCTGATTGGTTCAACATTCTGGTACTTCATCAGAACAGAGTGAAAACAAATCCAAAAAATGCTATAAACGAGCATTTCCTGCCACGCTTCCTCGACTTCATAGTGTGGGGGCATGAACATGAATGTTTGGTTGACCCACAGGAAGTTTCCGGGATGGGATTTCACATTTCGCAACCTGGTTCTTCAGTTGCTACATCACTCATTGATGGAGAATCAAAACCAAAACATGTACTTCTTCTAGAAATCAAGGGCAATCAGTATCGTCCAACTAAAATACCTCTGATGTCTGTGAGGCCTTTCGAGTATACAGAGGTTATATTAAAAGATGAGCCTGATATTGATCCCAATGATCAAAATTCAGTTCTTGAACATTTGGACAAAGTGGTCGGAAAGCTTCTAGAAAAATCAAGTAAAAAGGCTGCCAATAGAGCAGAACTTAAGCTTCCACTAATACGCATCAAGGTAGATTACTCTGGATTTATGACTATAAATCCTCAAAGATTTGGGCAGAAATATGTGGGGAAGGTTGCAAATCCTCAAGACATTCTTATATTCTCAAAGGCTGCAAAAAGGGCTAAGGGTGAAGGAAAAATTGATGATTCAGAGAGACTTCGTCCAGAAGAACTAAATCAGCAAAATATAGAGGCATTGGTTGCTGAAAATAATCTGAAAATGGAGATACTTCCGGTCAATGATTTGGATATTGCATTACACAATTTTGTGAACAAGGATGACAAGATGGCATTCTATTCTTGTGTGAAATACAATCTTGAAGAAACACGATGTTTTCCTCTTGATCTTGAGACTGAAGATGGAAGCTGTGGTGAAGGTGGTCCTTGTGAGTCAAGTTCCGATGTCACTATCTCCTCACCAGGATGA 1515 0.4125 MGDATNTLRVLVATDCHLGYMEKDEIRRHDSFQAFEEICSIAEQKQVDFLLLGGDLFHENKPSRSTLVKAIEILRRYCLNDRSVQFQVVSDQTVNFQNAFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKTVLGGSGVGQITVYPILIKKLQGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCEVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFIVWGHEHECLVDPQEVSGMGFHISQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKIPLMSVRPFEYTEVILKDEPDIDPNDQNSVLEHLDKVVGKLLEKSSKKAANRAELKLPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAKRAKGEGKIDDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDIALHNFVNKDDKMAFYSCVKYNLEETRCFPLDLETEDGSCGEGGPCESSSDVTISSPG 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2917 504 MobiDBLite consensus disorder prediction 482 504 - -
Sto4g2917 504 CDD MPP_Mre11_N 9 279 IPR041796 -
Sto4g2917 504 Gene3D Mre11, capping domain 311 409 IPR038487 -
Sto4g2917 504 Gene3D - 3 310 IPR029052 -
Sto4g2917 504 SMART Mre11_DNA_bind_2 299 452 IPR007281 GO:0004519|GO:0005634|GO:0006302|GO:0030145
Sto4g2917 504 Pfam Calcineurin-like phosphoesterase 8 254 IPR004843 GO:0016787
Sto4g2917 504 PANTHER DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 1 473 - -
Sto4g2917 504 SUPERFAMILY Metallo-dependent phosphatases 8 346 IPR029052 -
Sto4g2917 504 Pfam Mre11 DNA-binding presumed domain 300 452 IPR007281 GO:0004519|GO:0005634|GO:0006302|GO:0030145
Sto4g2917 504 TIGRFAM mre11: DNA repair protein (mre11) 6 400 IPR003701 GO:0004520|GO:0006302|GO:0008296|GO:0030870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2917 K10865 - gmx:100801335 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2917 4 29702988 29715877 Sto4g2917 4 29702988 29715877 ECH