Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2904 ATGGAAACTCCATCTTCTGATGGATCAATTCCAAAGCGGACTTTAAGAAGGAAAGCTAATTTGCGGAACTATGATGAGAATCTGATGGATGAAATGTTTGAGAAACAAATAGGTGATGATTTGAAGAAACGGAGTAGGACTAAAGAAGATTTGGAGAAAGAAACTGAAACTGAGGCTATGATTGCCTTTTCACTTGGTTTCCCAATTGATGCACTTCTTGAGGAGGAGATTAGAGCTGGAGTTGTGAGACAACTGGGCGGGAAGGAGCAGAATGATTATATTGTTATAAGGAATCATATATTAGCTAGATGGAGAGGCAATGTGCGGATGTGGCTAACAAAAGGCCAGATTAGAGAAACTGTCACCAGTGAGTGCCAACATTTGATAAATTCTGCTTAtgactttcttttttataatggGTACATAAATTTTGGGGTTTCGCAGTCATTTATTCCTCAGATGCCTGAGACAACTGAAGGATCTGTAATTATTGTTGGTGCTGGCCTTGCTGGGTTAGCAGCAGCAAGGCAGCTCTTGTCATTTGGTTTCAAGGTAGTTGTTCTAGAAGGGAGGAACCGGCCTGGTGGAAGAGTATATACTCAAAAGATGGGACTTGACGGAAAATTTGCTGCTTTGGATCTTGGTGGGAGTGTTATCACTGGCATTCATGCTAATCCTCTGGGAGTTTTGGCTCGACAGCTTTCTATACCACTTCATAAGGTCAGAGACAATTGCCCTTTGTACAAGCCAGATGGAGCACCTGTTGACAGGGCAATGGATTCAAGTATTGAATTCATTTTCAATAAATTGCTTGACAAAGTTATGGAATTGAGGCAGATAATGGGTGGATTTGCTAGTGATATCTCTCTTGGTTCAGTCTTGGAAACACTCAAGCTTTTGTATGCTGTGGCCAAAAGTACCGAGGAGAGGCAATTGCTTGATTGGCATCTTGCAAATTTAGAATATGCAAACGCTGGATGTCTTTCAAATTTGTCAGCTGCCTATTGGGATCAGGATGATCCTTATGAGATGGGTGGTGATCACTGTTTGCTTGCCGGAGGCAATTGGAGATTGATAAAAGCTCTATGTGAAGGAGTTCCTATTTTTTATGGAAAGACTGTCAATACTATTAGATATGGAAGTGAGGGTTGTGAGGTTATTGCTGGGGACCAAGCCTTTCAAGCGGATATGGTCTTATGCACTGTACCACTTGGAGTTTTGAAAAGGAAGACCATCTATTTTGAACCTGAATTACCTGCAAGAAAGCTGACAGCAATAGAGAGGCTGGGGTTTGGGCTTCTGAACAAAGTTGCAATGGTCTTTCCTTATGTGTTTTGGGGGGAAGATCTGGACACATTTGGACATCTCAATGAACATAGTCATCAACGTGGAGAATTCTTCCTGTTTTACAGTTACCATACTGTTTCTGGAGGTGCAGCACTTATTGCACTTGTGGCTGGTGAAGCTGCGCAAGCTTTTGAATTTACAGATCCATCCATTTTGCTTCATCGAGTTTTGACCACCCTCAGAGATTTTCTCTCTAGTATTCTCTGTCAATCATGTGTTATACTGCCTTCTGCAGGTATATATAACCCTAAAGGCATCTTTGTGCCCGACCCAATACAAACAATTTGTACAAGATGGGGCAGCGATCCTCTTTCTTATGGTTCATACTCTCATGTTAGTGTGCAATCATCTGGCAGTGATTATGATATACTCGCTGAAAATGTTGGAAACCGGCTTTTCTTTGCTGGTGAGGCTACAAGTAGGCAATATCCAGCTACTATGCATGGTGCTTTCTTGAGTGGCTTAAGAGAAGCTTCTCGCATTTACCAAGCAACTCGGTTTCGACAAAATAATCAGAGGAAGTACATGCCGAAGAATATTGGATTAATCAATGATATATTGGTGGACCTATTCAAGAAGCCTGATCTGGAATTTGGGAAGTTTGCTCTGTTATTTGATCCATTGTCAGAAAACCCTCAGTCAATGGGGCTTATGCAAATTACTTTTGGGAATGCTGAAGAAACTTATAGGGTAGAGTTATCAAACAGCAATCTGAATTCCACAAAGCTGCCATTGCAGCTTTACACTATTATATCTCGTGAACAGGCATACCATCTGCAACTTATAACTGGAGGGGATGAAAATAGGCTGTCATATTTGATAAAAAACCTTGGCTTGAAGCTTATGGGATCCAATGCTTTAACTATTGCAGGAAACTCCTTAATAGCCACTATTGCTAGCTCACGAAGAGGCAGAGGCAGGAATCGCTTAGTCAGTGGACAACACCATATTCTATAG 2304 0.4115 METPSSDGSIPKRTLRRKANLRNYDENLMDEMFEKQIGDDLKKRSRTKEDLEKETETEAMIAFSLGFPIDALLEEEIRAGVVRQLGGKEQNDYIVIRNHILARWRGNVRMWLTKGQIRETVTSECQHLINSAYDFLFYNGYINFGVSQSFIPQMPETTEGSVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGRVYTQKMGLDGKFAALDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGAPVDRAMDSSIEFIFNKLLDKVMELRQIMGGFASDISLGSVLETLKLLYAVAKSTEERQLLDWHLANLEYANAGCLSNLSAAYWDQDDPYEMGGDHCLLAGGNWRLIKALCEGVPIFYGKTVNTIRYGSEGCEVIAGDQAFQADMVLCTVPLGVLKRKTIYFEPELPARKLTAIERLGFGLLNKVAMVFPYVFWGEDLDTFGHLNEHSHQRGEFFLFYSYHTVSGGAALIALVAGEAAQAFEFTDPSILLHRVLTTLRDFLSSILCQSCVILPSAGIYNPKGIFVPDPIQTICTRWGSDPLSYGSYSHVSVQSSGSDYDILAENVGNRLFFAGEATSRQYPATMHGAFLSGLREASRIYQATRFRQNNQRKYMPKNIGLINDILVDLFKKPDLEFGKFALLFDPLSENPQSMGLMQITFGNAEETYRVELSNSNLNSTKLPLQLYTIISREQAYHLQLITGGDENRLSYLIKNLGLKLMGSNALTIAGNSLIATIASSRRGRGRNRLVSGQHHIL 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2904 767 SUPERFAMILY Homeodomain-like 54 155 IPR009057 -
Sto4g2904 767 SUPERFAMILY FAD/NAD(P)-binding domain 154 612 IPR036188 -
Sto4g2904 767 Gene3D - 244 566 - -
Sto4g2904 767 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 37 754 - -
Sto4g2904 767 Gene3D - 162 609 IPR036188 -
Sto4g2904 767 ProSiteProfiles SWIRM domain profile. 52 153 IPR007526 GO:0005515
Sto4g2904 767 SUPERFAMILY FAD-linked reductases, C-terminal domain 430 559 - -
Sto4g2904 767 Gene3D - 57 155 IPR036388 -
Sto4g2904 767 Pfam SWIRM domain 71 144 IPR007526 GO:0005515
Sto4g2904 767 PANTHER FLAVIN MONOAMINE OXIDASE 37 754 - -
Sto4g2904 767 Pfam Flavin containing amine oxidoreductase 169 610 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2904 Sto-Chr4 29632518 29634904 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-SWI3 Sto4g2904 Amino_oxidase 2.1e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2904 - - zju:107429908 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2904 4 29632518 29634904 Sto4g2904 4 29632518 29634904 ECH