Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2881 ATGGCTCTTCAGGCTGCTTCTTTGCTTCCTCCTGCTTTCTCCTCTATTACTAAAGAGGGAAAATATAATGTATCAGTCAAGGACTCCACCTTATTCGGACTCTCATTTTCAGACCATCTTAAAGCTCACTTCACCACTTCTGCATTAACATGCAAGAGGGGATACTCAAAGGAAATGGGCCTCGTGAGGGCCCAGCAGACAATGGAAACTACAACTCCAGTAGTGATGAAGGGCACAAGAGAAGGCAAGAAGACCCTTAGGAAGGGCAGCGTGATAATCACAGGGGCCTCCTCTGGGTTAGGACTAGCCACAGCTAAGTCTCTAGCTGAGACAGGAAAATGGCACATCATTATGGCTTGTAGGGACTTCCTCAAAGCAGAAAGAGCTGCAAAATCTGCAGGCATTGCAAAGGAAAACTACACCATCATGCATTTAGACCTTGCTTCTCTTGAAAGTGTCCATCAATTTGTAGATAACTTCAGAAGATCAGGGAGGCCACTGGATGTACTAGTCTGCAACGCCGCCGTTTACCTCCCTACTGCTAACCAACCTACCTTCACAGCTGAAGGATTCGAACTCAGTGTTGGAACAAACCATTTAGGCCATTTTCTTCTCTCAAGGTTGCTCATTGAGGATCTCAAAAACTCTGATTACCCTTCAAAGAGATTGATCATTGTTGGTTCCATCACAGGGAATACTAACACATTGGCTGGGAATGTGCCTCCCAAGGCATATAAGGATAGTAAAGTTTGTAATATGCTGATAATGCAAGAGTTTCATAGGAGGTATCATGAGGAAACTGGGATTACCTTTGCTTCGCTTTACCCTGGTTGTATTGCAACCACAGGCTTGTTCAGAGAGCACATTCCCTTGTTCAGACTTCTCTTCCCTCCTTTCCAAAGGTTCATCACCAAAGGCTATGTCTCTGAACATGAAGCAGGACACAGACTTGCCCAGGTTGTCAGTGAACCAAGCCTAACCAAATCTGGCGTTTACTGGAGCTGGAATAAGAACTCTTCTTCATTTGAGAACCGATTATCCCAAGAGGCTAGTGATGCAGACAAGGCTCGTAAGGTGTGGGAGATCAGTGAGAAACTGGTTGGTTTGGCCTAA 1113 0.4528 MALQAASLLPPAFSSITKEGKYNVSVKDSTLFGLSFSDHLKAHFTTSALTCKRGYSKEMGLVRAQQTMETTTPVVMKGTREGKKTLRKGSVIITGASSGLGLATAKSLAETGKWHIIMACRDFLKAERAAKSAGIAKENYTIMHLDLASLESVHQFVDNFRRSGRPLDVLVCNAAVYLPTANQPTFTAEGFELSVGTNHLGHFLLSRLLIEDLKNSDYPSKRLIIVGSITGNTNTLAGNVPPKAYKDSKVCNMLIMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQRFITKGYVSEHEAGHRLAQVVSEPSLTKSGVYWSWNKNSSSFENRLSQEASDADKARKVWEISEKLVGLA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2881 370 PRINTS Glucose/ribitol dehydrogenase family signature 90 107 IPR002347 -
Sto4g2881 370 PRINTS Glucose/ribitol dehydrogenase family signature 165 176 IPR002347 -
Sto4g2881 370 PRINTS Glucose/ribitol dehydrogenase family signature 267 284 IPR002347 -
Sto4g2881 370 Gene3D - 77 370 - -
Sto4g2881 370 CDD LPOR_like_SDR_c_like 88 369 - -
Sto4g2881 370 PANTHER - 243 369 IPR005979 GO:0016630
Sto4g2881 370 PANTHER - 1 244 IPR005979 GO:0016630
Sto4g2881 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 338 IPR036291 -
Sto4g2881 370 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 1 244 - -
Sto4g2881 370 PANTHER NADPH-PROTOCHLOROPHYLLIDE OXIDOREDUCTASE 243 369 - -
Sto4g2881 370 Pfam short chain dehydrogenase 91 282 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2881 Sto-Chr4 29428648 29430122 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2881 K00218 - csv:101208554 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2881 4 29428648 29430122 Sto4g2881 4 29428648 29430122 ECH