Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2873 ATGCGGGGTCCCTTAGGTGCAGTTATAGGAAGATACCCATCCAGTGATGGAAGTACTCAAGTGGGTGGAATCATAAGGCACAATAGGAAATGCCGAGACGTCGCCGTTCTGGTCATCTTTATAGCCTTCTGGATTGCCATGATTGTCAACTCCAGCTTTGGTTTCAACCAAGGAAACCCCTTAAGGCTTATATATGGGCTGGACTACAAAGGGAATGTGTGTGGGGACAGGCATGCTGGCCTTCGTCAATTGGAGCTCAAATATTGGTTAAATCCTAATCAGGTTTATCAGAGTGGATTGAAGGATACCCAAGTTAAATTGGCTGATGCACGCAGTATATGCTTGTTGGATTGTCCCATTCCCTCTGAAGACTCTCTTAACTGGGTGTGTGATTACCCTGAAGGAAGTATCCGTCTTTCAACGGATGATTGGATCGATAGGAACTATGATTATTTCGAGTTCCTTGATCCAGAAATGAGAAACTCCTCTCTTCAACTTCAGGGCCCTTGTTATCCTGTCATTTTTCCAAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCTCGAGCATCAAACGTGTCCTTAAAGCATTGGCAACAGATGGGTGGAGTTAACATCAATGATGACATTGTTATAGATAAATCAATCCACAAGTCTATCAATTCTCGGTCAGCTGTCTTGAAGAGATACATGGCTGATATAGGAAAGTCGTGGCCTGTGCTGATTGTTTGTGGAGGGATTTTACCTCTATTTTTGTCTGTAATTTGGCTGCTAATGATTCGACATTTTGTTGCTGCAATGCCTTGGATAACTGTGGTGCTCTTTAATGTTCTCATAGTATCAGTCACAATGTACTACTACCTAAAAGCTGGATGGATAGGAAATGATGCTATTTCGCCCATCATTGGTGAACATGACCCATACATTCATGTATTTGGGAGGGGCCTCAACCATCTGCGAGGTGTTGCTGTCCTCATGACCTTTATTATGGCTGTTGCTATTCTTACGTCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCTGTCCTGAAGgttgctgcaaAAGTGATAGGAGAAGTCCAAGCGCTCATCATTTTTCCTCTCTTACCATATGGTATCCTTGCAGTATTCTACATGTTTTGGATTTCCGCTGCTCTTCACTTGTTCAGCTCTGGTGAGGTCGTTCAGAATAACTGCAACTCTAACTGCTGTGCATATGATCTCATGGCAAAGAGGGTGAATTGTGACCGTTGTTGTGGATATAGCATTCGTTACACACCACATATTGGATATGCTATCCTTTTTCATCTATTTGGTTGTTATTGGGCAACACAGTTTTTCATAGCATGCTCGTCAACGGTGATTGCTGGATCTGTTGCTTCTTATTACTGGGCTCGTGGTGAAACATCTCCTGAAATTCCATTTTTTTCAGTCTTATCCTCCACGAAGAGGCTTATGCGTTACAGCCTTGGATCTGTGGCCCTTGGCTCTCTAATTGTATCATTTGTGGAATCAATCCGCTTTCTGCTTGAATCCATTCGTCGAAGGCTAAAAATCTCTAGTCACACACCTGACAACTGGATAGGCAAGGCTGCATCCCAATCCTCTCAATGTTTTCTCAGGTGTATTGAGTGGACCATAAAATCAGTGAACCGAAATGCTTATATCATGATTGCTATAACGGGTAAAAGTTTCTTTACATCTTCTGCTATCGCCACAGAATTGATCATGAACAACATCCTACGAATTGGGCGTGTCAATGTGATTGGAGATGTCATTTTGTTCCTTGGAAAGCTATGTGTCAGCCTCTCAAGTGCTGTGTTTGCTTTCCTCATGTTGGACACTCACAGATACAGAGCTGCTCATAATAAGATCTCATCTCCCCTTTTGCCTGTTGTGGTCTGCTGGGCTCTCGGATATATTGTCGCAACTCTTTTCTTTGCTGTGGTCGAGATGTCGATCGACACCATCATTCTCTCGTTCTGCCAAGATTCTGAAGAGCATCAAGGGACAGCCCAGTATGCTCCACCCCTTCTCATTGAAACTCTTAATGACCAAAATGAGACGCAGAGGCTTACACAAGGACCCCAATGA 2097 0.4297 MRGPLGAVIGRYPSSDGSTQVGGIIRHNRKCRDVAVLVIFIAFWIAMIVNSSFGFNQGNPLRLIYGLDYKGNVCGDRHAGLRQLELKYWLNPNQVYQSGLKDTQVKLADARSICLLDCPIPSEDSLNWVCDYPEGSIRLSTDDWIDRNYDYFEFLDPEMRNSSLQLQGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGVNINDDIVIDKSIHKSINSRSAVLKRYMADIGKSWPVLIVCGGILPLFLSVIWLLMIRHFVAAMPWITVVLFNVLIVSVTMYYYLKAGWIGNDAISPIIGEHDPYIHVFGRGLNHLRGVAVLMTFIMAVAILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLLPYGILAVFYMFWISAALHLFSSGEVVQNNCNSNCCAYDLMAKRVNCDRCCGYSIRYTPHIGYAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGETSPEIPFFSVLSSTKRLMRYSLGSVALGSLIVSFVESIRFLLESIRRRLKISSHTPDNWIGKAASQSSQCFLRCIEWTIKSVNRNAYIMIAITGKSFFTSSAIATELIMNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHRYRAAHNKISSPLLPVVVCWALGYIVATLFFAVVEMSIDTIILSFCQDSEEHQGTAQYAPPLLIETLNDQNETQRLTQGPQ 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2873 698 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 695 - -
Sto4g2873 698 Pfam Plasma-membrane choline transporter 325 667 IPR007603 GO:0022857|GO:0055085
Sto4g2873 698 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 695 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2873 Sto-Chr4 29381385 29387587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2873 K15377 - gmx:100803501 1279.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2873 4 29381385 29387587 Sto4g2873 4 29381385 29387587 ECH