Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2862 ATGGGATCGTATGGATTTTTCCTGATCTGTGTTCTGCACTCTGCAATAGCCCTAACTTGTGGAGCTCTGATGATGTTCTTCTCCAAGGAGATCTGCGCGTTCGGCCATGGCCATGAGACTGCGATAAAGCTTCAGGGATCAACGCCTCACGATCAATTACTGATTCGAACTTCAGATTCCTTCTCCGGTTTGCTGCTATTCACCATCGGATTCTTTCTCTTCATGATCGCGTTCGTTAAGGACAGGGAGTTCCAGAGCTTCTTCGCCAGAGGCTGTGTTCTTCTTCACGTTTCTATGGCGGTTTGGAGATTCTACTTCTTGAGGAAAGTTGAAGATCTCGCCCATGATTGGCCCAGACAGGTTCTTGGTGACATAGCCTTGGCGGTTTCTTGGGTTTTCTTTCTTGTGTATTCATGGAGGGAGAAgAATCTGGGAGCTATAGCTGTGCAAAAGTCATTGAATTTGCAAGTGAGATTCTCCCGCAAGTGTCATTCTAGGGAAGTAAGAATGGAAGCTAATGTTAGTCGTAACGTAGAGGACAACAGAGTGGAATCTAGAGGCGCGTTGGTTGTCTTAGAAGGCTTGGATCGTTCTGGGAAGTCTTCTCAGTGTAGCAGACTAGTTTCGTTCTTGGAGAGACAAGGGATCTCTGCCGAATTATGGAGATTTCCTGATAGAAGTACGAATGTTGGGCAGATGATATCTGCCTATCTCGCTAACACATCTCAATTAGATGATCGTACTATTCATCTCCTCTTTAGTGCAAATCGTTGGGAAAAAAGATCATTGATGGAAACTAAACTGACGACAGGAACAACCCTCATTGTTGACCGTTATTCTTATTCTGGGGTGGCTTTCTCATCGGCCAAAGGACTTGACCTTGAATGGTGTAAGGCACCAGAGATAGGGTTGTTAGCTCCAGATGTGGTTATATACCTTGACATATCACCAGAGAAAGCTGCAGATAGAGGAGGGTATGGAGGTGAGAGATATGAAAAGCTGGAGTTTCAGAAGAAAGTTGCTGAAAGCTACAAAGTTCTCTATGATGCCTCCTGGAAGGTTGTAGATGCTTTCCAATCCATAGAAGACGTGGAGAAAGAGTTGCAAGATATTGTACTTGATAATCCAATCACATCCTTGTAA 1143 0.4444 MGSYGFFLICVLHSAIALTCGALMMFFSKEICAFGHGHETAIKLQGSTPHDQLLIRTSDSFSGLLLFTIGFFLFMIAFVKDREFQSFFARGCVLLHVSMAVWRFYFLRKVEDLAHDWPRQVLGDIALAVSWVFFLVYSWREKNLGAIAVQKSLNLQVRFSRKCHSREVRMEANVSRNVEDNRVESRGALVVLEGLDRSGKSSQCSRLVSFLERQGISAELWRFPDRSTNVGQMISAYLANTSQLDDRTIHLLFSANRWEKRSLMETKLTTGTTLIVDRYSYSGVAFSSAKGLDLEWCKAPEIGLLAPDVVIYLDISPEKAADRGGYGGERYEKLEFQKKVAESYKVLYDASWKVVDAFQSIEDVEKELQDIVLDNPITSL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2862 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 374 IPR027417 -
Sto4g2862 380 CDD TMPK 189 374 - -
Sto4g2862 380 ProSitePatterns Thymidylate kinase signature. 275 287 IPR018095 GO:0004798|GO:0005524|GO:0006233
Sto4g2862 380 PANTHER THYMIDYLATE KINASE 184 374 - -
Sto4g2862 380 TIGRFAM DTMP_kinase: dTMP kinase 186 367 IPR018094 GO:0004798|GO:0005524|GO:0006233
Sto4g2862 380 Gene3D - 181 379 IPR027417 -
Sto4g2862 380 PANTHER THYMIDYLATE KINASE 184 374 - -
Sto4g2862 380 Hamap Thymidylate kinase [tmk]. 188 376 IPR018094 GO:0004798|GO:0005524|GO:0006233
Sto4g2862 380 Pfam Thymidylate kinase 192 367 IPR039430 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2862 Sto-Chr4 29309019 29324458 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2862 K00943 - gmx:100778161 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2862 4 29309019 29324458 Sto4g2862 4 29309019 29324458 ECH