Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2852 ATGGCAGCAGCACCGGCTGCGGCCGTGAACGGAATAAAGATAGCCACATCCTCGCAGGCATACCTTGAAAGCAAGGCCCTGAAGGAAACCAGACCTCTGATTTCTGGACTCTCTCGTCACTTCTACAATCATGGATGGGTCTCAGGAACTGGTGGAAGCATCACCATTAAACTCCCCAATGACTTCATTCCCAAGTCCCATAAGCTTATTGTAATAACTCCTTCAGGTGTTCAGAAGGAAGGAATGGAAGAACCACAGGACATGTTCGTGTTATCCTACAGTGGATCAATCTTGTGTGGTATATCTCCAAAACCAAAACCTCACCTGCATAAGCCTCCAAAGTTCTCTGATTGGGGTCCACTTTTCATCAAGGCTGAGTATTCTCGTTACCTCTTTAATGCTCCTATCAAACTTAACCAATTGGGTTTGGACTGGTCTCCTCCAAATCAGGGTCCAATACAAAGAGTACAAAGTGGTATGAGGATTGGTAAGGAGTTGAATGTGTCAACCAAGGCAAGGAAATCTGACAGTGAAATCAATTCATTCCCACGCTGCGTTGTTCTTGACATTGAGGGGACTACCACTCCCATATCATTTGTTACAGATGTTCTTTTCCCATATGCACGTGATAATGTTGGCAGGCATCTATCTGCAACATTTGATACCCCTGAGACGCAAAATGACATTAAGCTGCTTCGCTCCCAAGTGCAAACTGACCTGGAACAAGGGGTTGCAGGTGCTGTGCCTATCCCCCCAGATAATGCCAGGAAAGAGGATATCATTGCTGCTTTAGTTGCTAATGTAGAAGCTATGATTAAAGCTGATAGAAAGATCACTGCCTTGAAAGAGTTGCAGGGTCATATATGGCGAACTGGTTTTGAGAATAATGAATTGGAGGGAATAGTTTATGATGATGTACCAGAAGCTCTTGAGAAGTGGCATGCCTTGGGTACAAAGGTGTACATATATTCTAGTGGTAGTAGATTGGCACAAAGGCTCATATTTGGAAATACAAACTATGGGGACCTACGAAAATACTTATCTGGGTTTTTTGACACCTCAGTGGGGAACAAAAGGGAGACACGCAGTTACTTTGAAATTTCTGAGTCACTTGGTGTTGATAAACCATCAAATATCTTATTTCTGACTGATGTTTTTCAAGAAGCGACAGCTGCAAAGGCAGCAGGTTTGGAGGTGATGATTTCTATTCGACCTGGAAATGGACCTCTCCCAGAAAATCATGGGTTTAACACAATCAATTCCTTCTTGGAGATATGA 1278 0.4343 MAAAPAAAVNGIKIATSSQAYLESKALKETRPLISGLSRHFYNHGWVSGTGGSITIKLPNDFIPKSHKLIVITPSGVQKEGMEEPQDMFVLSYSGSILCGISPKPKPHLHKPPKFSDWGPLFIKAEYSRYLFNAPIKLNQLGLDWSPPNQGPIQRVQSGMRIGKELNVSTKARKSDSEINSFPRCVVLDIEGTTTPISFVTDVLFPYARDNVGRHLSATFDTPETQNDIKLLRSQVQTDLEQGVAGAVPIPPDNARKEDIIAALVANVEAMIKADRKITALKELQGHIWRTGFENNELEGIVYDDVPEALEKWHALGTKVYIYSSGSRLAQRLIFGNTNYGDLRKYLSGFFDTSVGNKRETRSYFEISESLGVDKPSNILFLTDVFQEATAAKAAGLEVMISIRPGNGPLPENHGFNTINSFLEI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2852 425 Pfam Class II Aldolase and Adducin N-terminal domain 37 107 IPR001303 -
Sto4g2852 425 Gene3D - 294 425 IPR023214 -
Sto4g2852 425 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 125 425 - -
Sto4g2852 425 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 6 125 - -
Sto4g2852 425 Gene3D - 197 293 - -
Sto4g2852 425 SFLD Haloacid Dehalogenase 184 423 - -
Sto4g2852 425 SUPERFAMILY HAD-like 184 425 IPR036412 -
Sto4g2852 425 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 184 422 IPR023943 GO:0000287|GO:0019509|GO:0043874
Sto4g2852 425 Hamap Enolase-phosphatase E1 [mtnC]. 182 419 IPR023943 GO:0000287|GO:0019509|GO:0043874
Sto4g2852 425 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 6 125 IPR017714 GO:0005737|GO:0019509|GO:0046872
Sto4g2852 425 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 125 425 IPR017714 GO:0005737|GO:0019509|GO:0046872
Sto4g2852 425 SUPERFAMILY AraD/HMP-PK domain-like 28 100 IPR036409 -
Sto4g2852 425 Gene3D - 27 113 IPR036409 -
Sto4g2852 425 CDD HAD_EP 185 406 IPR023943 GO:0000287|GO:0019509|GO:0043874
Sto4g2852 425 SFLD enolase-phosphatase 184 423 IPR023943 GO:0000287|GO:0019509|GO:0043874
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2852 Sto-Chr4 29231413 29235972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2852 K16054 - csin:114316542 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2852 4 29231413 29235972 Sto4g2852 4 29231413 29235972 ECH