Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2787 ATGATCACGAGCTTGGATGCGGGCGATTCCATTGTTCTGGCGAAGTCGTTCTCCAATATGCTTAGTTTGGCGAATTTGGCGGAGGAGGTTCAGATCGCTTACCGGAGaaggaacaaattgaagaaaggcgatttcgccgatgagaacAGCGCCACGACGGAATCCGACATCGAAGAAACTCTGAAGAAGCTCGTGGTGGATTTGAACAAGTCTCCGGAACAAGTCTTCGATGCGATCAAGAACCAGACCGTTGATCTCGTTCTTACCGCTCATCCTACCCAGTCTGTTCGTCGATCTCTGCTTCAGAAATACGGAAGGTAA 321 0.4393 MITSLDAGDSIVLAKSFSNMLSLANLAEEVQIAYRRRNKLKKGDFADENSATTESDIEETLKKLVVDLNKSPEQVFDAIKNQTVDLVLTAHPTQSVRRSLLQKYGR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2787 106 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 87 98 IPR018129 -
Sto4g2787 106 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 2 1 106 - -
Sto4g2787 106 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 2 104 IPR015813 GO:0003824
Sto4g2787 106 Pfam Phosphoenolpyruvate carboxylase 1 104 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g2787 106 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 106 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2787 Sto-Chr4 28749218 28749538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2787 K01595 - vvi:100267525 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0178 7 1336659 1341718 Sto4g2787 4 28749218 28749538 CCT
Sto4g2787 4 28749218 28749538 Sto7g0463 7 3416747 3419092 CCT
Sto4g2787 4 28749218 28749538 Sto4g2787 4 28749218 28749538 ECH