Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2783 ATGATGCGCCAGGCAGGAAGGTACATGGCTGTTTACAAAAAGCTTGCTGAGAAACATCCATCCTTCAGAGAGAGGTCAGAGACAACTGATCTCATTGTGGAAATTTCTTTGCAGCCTTGGAAAGCTTTCAGACCTGATGGGGTAATTATTTTCTCTGACATACTTACACCTTTGCCTGCATTCGGTGTCCCATTTGACATAGAAGAAGTGAGGGGACCTGTTATATCGTCACCAATACGCTCTGAAGAGGGTTTAAAGGCTTTGCATCCGATTGATCTGGAAAAACTTAGTTTTGTTGGAGAATCACTTAAGATACTACGCAAGGAGgtTGGTGGTCATGCtgctgttttgggttttgtgggaGCACCTTGGACAATAGCGACGTATATCGTAGAAGGGGGTACAACACGCACTTATACAATCATAAAGAGCATGTGCCATACTCAACCACATGTATTGAGAACTCTTCTTTCTCACTTGACAAAGGCAATAACAGAGTACATTATTTACCAAGTTGAGTCTGGAGCTCATTGCATACAAATATTTGATTCATGGGGTGGACAACTACCACCGGATATGTGGGAACGCTGGTCAAAACCTTATATTAAAGAGATTGTTGATTCGGTGAAGAAGAAATGCCCTGAAATACCACTTGTCCTGTATATAAACGGAAATGGTGGCCTTCTAGAGCGTATGAAGGAAACTGGGGTTGATGTTATTGGTCTAGACTGGACAGTGGATATGGCAGATGGAAGAAGACGATTGGGTAATGGAATAAGCGTGCAGGGAAATGTGGACCCCGCTTACTTGTTCTCCCCTCTCAATACTGTGACTGAAGAAATTCAGAGGGTTGTGAGGTGTGCAGGGCCGAGACGGCACATCCTTAATCTAGGGCACGGTGTTCTTGTTGGCACGCCTGAAGAAGCAGTTGCACATTTCTTTGAAGTGGCAAGGAGCTTGGAGTTTGAGACGCTATTTCAAGATAAAGCTGCTGAGGAACCTAACCTTGTAATTTGA 1017 0.4297 MMRQAGRYMAVYKKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDGVIIFSDILTPLPAFGVPFDIEEVRGPVISSPIRSEEGLKALHPIDLEKLSFVGESLKILRKEVGGHAAVLGFVGAPWTIATYIVEGGTTRTYTIIKSMCHTQPHVLRTLLSHLTKAITEYIIYQVESGAHCIQIFDSWGGQLPPDMWERWSKPYIKEIVDSVKKKCPEIPLVLYINGNGGLLERMKETGVDVIGLDWTVDMADGRRRLGNGISVQGNVDPAYLFSPLNTVTEEIQRVVRCAGPRRHILNLGHGVLVGTPEEAVAHFFEVARSLEFETLFQDKAAEEPNLVI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2783 338 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 1 333 - -
Sto4g2783 338 CDD URO-D 1 319 IPR006361 GO:0004853|GO:0006779
Sto4g2783 338 Pfam Uroporphyrinogen decarboxylase (URO-D) 1 319 IPR000257 GO:0004853|GO:0006779
Sto4g2783 338 Gene3D - 1 322 IPR038071 -
Sto4g2783 338 PANTHER UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC 1 333 - -
Sto4g2783 338 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 117 133 IPR000257 GO:0004853|GO:0006779
Sto4g2783 338 TIGRFAM hemE: uroporphyrinogen decarboxylase 1 318 IPR006361 GO:0004853|GO:0006779
Sto4g2783 338 SUPERFAMILY UROD/MetE-like 1 321 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2783 Sto-Chr4 28719041 28720923 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2783 K01599 - gmx:100807032 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2783 4 28719041 28720923 Sto4g2783 4 28719041 28720923 ECH