Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto4g2773 | ATGGTGATGCCTGGTCATCGTGAGTCGAACTTACAGAAAGAGCTGAACCGATACATTCCTACTGCCGCAGCTTTTGGCGGCATGTGCATCGGCGCCCTAACAGTGTTGGCGGATTTCATGGGGGCGATCGGTTCAGGGACTGGAATATTACTTGCAGTGACAATCATCTATCAATACTTTGAGACATTTGAGAAGGAAAGAGCTAGTGAGCTTGGCTTCTTTGGTTTCTAA | 231 | 0.4762 | MVMPGHRESNLQKELNRYIPTAAAFGGMCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto4g2773 | 76 | Pfam | SecY | 1 | 59 | IPR002208 | GO:0015031|GO:0016020 | |
| Sto4g2773 | 76 | PANTHER | F9K20.24 PROTEIN | 1 | 76 | - | - | |
| Sto4g2773 | 76 | SUPERFAMILY | Preprotein translocase SecY subunit | 1 | 66 | IPR023201 | - | |
| Sto4g2773 | 76 | Gene3D | SecY subunit domain | 1 | 74 | IPR023201 | - | |
| Sto4g2773 | 76 | PANTHER | SECY/SEC61-ALPHA FAMILY MEMBER | 1 | 76 | IPR002208 | GO:0015031|GO:0016020 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sto4g2773 | Sto-Chr4 | 28639007 | 28639237 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sto4g2773 | 1 | 76 | Miscellaneous Gene Families | AT2G34250 | 97.368 | 1.19e-47 | 155 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto4g2773 | K10956 | - | zju:107432550 | 154.836 |