Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2733 ATGATGTCACTAACAAGCCAAAGCCTCCATTTTACTGCCAAAAATTTGGTCCCCATTTCTTATGCTTCATCATTCAACTTGTTTTCGCTAAGAAATCATTTTAAACTGAATTCTACAGTTTCTACTCGCAAATGGGTTTCCTACTCCCAATCTCGAGTTTCTTCCATGAATGAGAAGGCCATTTCGCCGGCGAAATTGTTTCAAGTGGTCGCAGATGATCTCCAAGTGCTTGACAAAAGTCTTCTGTCGATTGTTGGCACAGAAAACCCAGTTTTAGCATCTGCTGCTGAGCAGATTTTTAGTGCTGGTGGGAAGAGAATGAGGCCAGCTCTGGTGTTTATGGTATCAAGAGCCACAGCAGAGCTAGTTGGATTGAGGGATCTTACTGTAAAGCATCGGCGTCTAGCAGAGATTATTGAGATGATTCATACTGCAAGTTTGATACATGATGATGTATTAGATGAGAGTAACCTGCGAAGAGGAAAGGAAACTGTTCATCAACTGTATGGAACAAGGGTGGCAGTGTTGGCTGGAGACTTCATGTTTGCACAGTCATCATGGTATCTTGCAACTCTTGAAAACCATGAAATCACTAAACTTATCAGTCAAGTGATTAAAGATTTTGCAACTGGAGAAATAAAGCAGGCTTCAAGCTTGTTTGACTGTGACATTCAACTTGAGGATTATCTAATTAAGAGTTACTACAAAACAGCATCCTTAATTGCTGCCAGTACAAAAGCAGCTGCAATCTTTACAGAGCAACTAGGAAAGCCTGCTGGCACTGACCTTGCCAAAGGCAACCTTACTGCACCTGCAATTTTTGCATTGGAGGAAGAACTGAAGTTGAGAGACATCATTGAGTCTGAATTTAGCGAGCCGGGCTCGCTTGATGAGGCCATCGAATTGATTAGGAGTCGCGGGGGCATCGAACGAGCACGAGAGCTCGCCAAAGAAAAAGCCGATCTTGCAATAGAATATCTCCAATGCCTTCCTCAGAGCATGTTTTATTTAGCTCTTGAGGGCATGGTGGCCTATAATCTCCAAAGGATTGCATAA 1056 0.4271 MMSLTSQSLHFTAKNLVPISYASSFNLFSLRNHFKLNSTVSTRKWVSYSQSRVSSMNEKAISPAKLFQVVADDLQVLDKSLLSIVGTENPVLASAAEQIFSAGGKRMRPALVFMVSRATAELVGLRDLTVKHRRLAEIIEMIHTASLIHDDVLDESNLRRGKETVHQLYGTRVAVLAGDFMFAQSSWYLATLENHEITKLISQVIKDFATGEIKQASSLFDCDIQLEDYLIKSYYKTASLIAASTKAAAIFTEQLGKPAGTDLAKGNLTAPAIFALEEELKLRDIIESEFSEPGSLDEAIELIRSRGGIERARELAKEKADLAIEYLQCLPQSMFYLALEGMVAYNLQRIA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2733 351 SUPERFAMILY Terpenoid synthases 65 349 IPR008949 -
Sto4g2733 351 Gene3D Farnesyl Diphosphate Synthase 253 350 IPR008949 -
Sto4g2733 351 ProSitePatterns Polyprenyl synthases signature 1. 147 161 IPR033749 -
Sto4g2733 351 Gene3D Farnesyl Diphosphate Synthase 48 252 IPR008949 -
Sto4g2733 351 CDD Trans_IPPS_HT 87 349 IPR000092 GO:0008299
Sto4g2733 351 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 52 252 - -
Sto4g2733 351 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 252 350 - -
Sto4g2733 351 Pfam Polyprenyl synthetase 91 253 IPR000092 GO:0008299
Sto4g2733 351 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 252 350 - -
Sto4g2733 351 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 52 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2733 Sto-Chr4 28324484 28327083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2733 K05356 - gmx:100783538 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2733 4 28324484 28327083 Sto4g2733 4 28324484 28327083 ECH