Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2705 ATGGAAAAAGTCAGCGCCTTGGGAGAACGGCTGAAAATAAGTGGGACTGAGGTGGGTCGGAAGATGACTGCAGGCATGAGTTCTATGAGCTTCAAGATGAAGGAGTTTTTTCAGGGTCCAAACCAGGCTGATAAGCTTGTTGAGGATGCTACCTCTGAGACCCTTGATGAGCCTGATTGGGCTATGAATCTTGAGCTCTGTGACTTGATCAACAATGACAAGGTCAACAGCGTTGAATTGATCCGTGCAGTAAAGAGACGGATCGCGATGAAGAGTCCTAGGATTCAGTACCTGGCTTTGGTTTTGCTTGAAACGTGTGTTAAGAATTGTGAGAGGGCCTTCTCAGAAGTGGCAGCTGAGAGAGTCCTTGATGAAATGGTCAGGTTGATTGATGATCCTCAGACTGTTGTGAATAACCGGAACAAGGCTTTAATCCTCATTGAGGCATGGGGAGAGTCAACCAGCGAGCTTCGTTATTTGCCTGTATATGAAGAAACATACAAGAGTTTGAAATCAAGGGGCATTCGGTTCCCAGGTCGTGACAATGAAAGCTTGGCTCCTATTTTCACTCCTCCTCGTTCAGTTACTGCTCCAGAAGTTGATGTTGGTCATCAAGGACAGACTCAGCATGATATTCCTCCGCAAAGTTTTACACCTGAACAAACAAAGGAGGCTTTTGATGTTGCAAGAAATAGCATTGAGCTTCTTTCCACTGTTTTATCTTCATCACCCCAACAGGATGTTCTAAAGCCTCTGCTCGTCGTTCTCTCCTCTGCTCCGGTCGAAGGCCATGTGCAGGATGATTTGACTACGACACTTGTACAGCAGTGTCGTCAGTCTCAATTTACTGTCCAGCGAATTGTCGAGACTGCTGGGGATAACGAGGCATTGCTTTTTGAGGCCTTGAATGTTAATGATGAGATTCAGAAGGTTCTCTCCAAGTTTGAAGAGTTGAACAAGCCTAGTGCTCCTCCTCCAGAACACGAACCTGCTATGATACCTGTTGCCGTTGAACCAGACGAGTCGCCTCGTAATACGAAGGAAGATGCCTTGGTCAGAAAGCCAGCTAGCTCAAGAGCTGCTGTTCATGGAGGGAACAACGATGACATGATGGATGATCTTGATGAGATGATATTTGGGAAGAAAGGTGGGGATGCATCATCATATGGTAACCAAGATCCAAAGAAGCAGCAGCCATCAAAAGATGATCTCATCTCCTTCTAG 1224 0.4608 MEKVSALGERLKISGTEVGRKMTAGMSSMSFKMKEFFQGPNQADKLVEDATSETLDEPDWAMNLELCDLINNDKVNSVELIRAVKRRIAMKSPRIQYLALVLLETCVKNCERAFSEVAAERVLDEMVRLIDDPQTVVNNRNKALILIEAWGESTSELRYLPVYEETYKSLKSRGIRFPGRDNESLAPIFTPPRSVTAPEVDVGHQGQTQHDIPPQSFTPEQTKEAFDVARNSIELLSTVLSSSPQQDVLKPLLVVLSSAPVEGHVQDDLTTTLVQQCRQSQFTVQRIVETAGDNEALLFEALNVNDEIQKVLSKFEELNKPSAPPPEHEPAMIPVAVEPDESPRNTKEDALVRKPASSRAAVHGGNNDDMMDDLDEMIFGKKGGDASSYGNQDPKKQQPSKDDLISF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2705 407 SUPERFAMILY GAT-like domain 175 320 - -
Sto4g2705 407 PIRSF TOM1 27 403 IPR014645 -
Sto4g2705 407 Pfam VHS domain 42 174 IPR002014 GO:0035091|GO:0043130
Sto4g2705 407 PANTHER TOM1-LIKE PROTEIN 1 1 250 IPR044836 GO:0035091|GO:0043130|GO:0043328
Sto4g2705 407 PANTHER TOM1-LIKE PROTEIN 1 254 407 IPR044836 GO:0035091|GO:0043130|GO:0043328
Sto4g2705 407 SMART VHS_2 43 174 IPR002014 GO:0035091|GO:0043130
Sto4g2705 407 Pfam GAT domain 230 319 IPR004152 GO:0035091|GO:0043130
Sto4g2705 407 Gene3D - 216 321 IPR038425 -
Sto4g2705 407 MobiDBLite consensus disorder prediction 366 380 - -
Sto4g2705 407 SUPERFAMILY ENTH/VHS domain 36 178 IPR008942 -
Sto4g2705 407 ProSiteProfiles GAT domain profile. 230 320 IPR004152 GO:0035091|GO:0043130
Sto4g2705 407 CDD GAT_GGA_like_plant 226 318 - -
Sto4g2705 407 MobiDBLite consensus disorder prediction 336 407 - -
Sto4g2705 407 ProSiteProfiles VHS domain profile. 50 178 IPR002014 GO:0035091|GO:0043130
Sto4g2705 407 CDD VHS 43 172 - -
Sto4g2705 407 Gene3D - 37 195 IPR008942 -
Sto4g2705 407 PANTHER TOM1-LIKE PROTEIN 1 254 407 - -
Sto4g2705 407 PANTHER TOM1-LIKE PROTEIN 1 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2705 Sto-Chr4 28125350 28131143 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2705 - - zju:107414831 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2705 4 28125350 28131143 Sto4g2705 4 28125350 28131143 ECH