Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2646 ATGGCTCTTCTCCATCTTGCCTCTCTCTCACTTCCATCTAAAATGCTTCCTCTCCAATATTATGGTACAACAAAAACATCCTCTTCTTCCAATTCATCATTATCAAAAATCCAATGCACAAAATCAAATATTAATGTTTCCACTACTTCTTCTCCAATTGTTCGTCGATCTGCTGATTTCAAGCCTACACTTTGGACTTATGATTACGTTCAGTCATTGGGTAGCAAATACAAGgaagAATCATATGCAAAGCAAAACATAGAGCTTAAGGAAGAAGTGAGGATGATGCTTgacaagaagaaggaagaagagccTCTACTTCAACTTGAGTTTATTGATGTCTTGCAAAGGCTTGGGGGTGATGAGAAAGATGTACATGCCACTTCACTTGAGTTTAGACTCTTGAGGCAGCATGGATTTAATTTATCAACAGAGGTGTTTGATGGGTTTTTAGATGAAATGGgtaatttcaaaaagttattgtCAGCTGATATTCAAGGAGTGCTTTCACTATATGAAGCATCATTTCTCACAATGGAGAATGAAAGTATTTTGGACAAAGCAAGAGAATTCAGCAGAGAAATTCTGGAAGAACATTATGTGACGagggagaagaaagagaatgactTTATGTCATTGTTAATAAATCATGCATTGGAGGTTCCATTGCATTGGAGGATGCAAAGATGGGAGGCTCGTTGGTTCATTAAAGCATATGAAACAGCTCCTAATGTGATTCCTTCTTTGCTTCAATTTGCTAAACTGGATTTCAACATGCTTCAAGCCACCTATCTAGAGGAATTGAAGGATGTTTTaagAGGGTGGAAAAGAATTGGAAGTCTGACAGAAAAGTTAGGGTTTTCAAGGGATAGATCGCTGGAAGACTTTGTTTGGTCAACGGGATTTAATTATCTGCCACAAGATGGGAGATTGAGAATAGGCGTAACAAAGGCTGCTTCACTAGTCACGCAAATAGATGACGTTTATGATGTCTATGGTACTTTGGATGAGCTTGAGCTCTTCACACAATTTTGGGCAGAGTTATGTAAATCATATCTAGTTGAAGCAAGATGGTACTACAATGGATATAAGCCAAGTCTGCAAGAATATCTCGAGAATGCATGGATTTCAGCTTCTTCAAACGTTATGGTTGTTCATGCTTATTATTTCCTTCGACATCCAGTAAGGAAACAAGACTTGGATTACTTCGAACAAGACCCTCCTATATTTCGTTACTTAGGTCTCATTTTTCGCATCGCTAATGATCTCGGAACATCCAAGATGGAGAGAGGGGATGTTCCGAAAGCACTGCAATGCTACATGAATGAATTCGAAGCATCTGAAGAAGAAGGTCGTGAATATTTAGGATCAATGATAAGACAGATCAGTGGTTCTACGAATATGGTGATGGCTATGGTGATCAGCAAACTGAAGCTCGCATAA 1443 0.368 MALLHLASLSLPSKMLPLQYYGTTKTSSSSNSSLSKIQCTKSNINVSTTSSPIVRRSADFKPTLWTYDYVQSLGSKYKEESYAKQNIELKEEVRMMLDKKKEEEPLLQLEFIDVLQRLGGDEKDVHATSLEFRLLRQHGFNLSTEVFDGFLDEMGNFKKLLSADIQGVLSLYEASFLTMENESILDKAREFSREILEEHYVTREKKENDFMSLLINHALEVPLHWRMQRWEARWFIKAYETAPNVIPSLLQFAKLDFNMLQATYLEELKDVLRGWKRIGSLTEKLGFSRDRSLEDFVWSTGFNYLPQDGRLRIGVTKAASLVTQIDDVYDVYGTLDELELFTQFWAELCKSYLVEARWYYNGYKPSLQEYLENAWISASSNVMVVHAYYFLRHPVRKQDLDYFEQDPPIFRYLGLIFRIANDLGTSKMERGDVPKALQCYMNEFEASEEEGREYLGSMIRQISGSTNMVMAMVISKLKLA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2646 480 Gene3D - 65 259 IPR036965 GO:0010333|GO:0016829
Sto4g2646 480 PANTHER OS04G0344100 PROTEIN-RELATED 344 466 - -
Sto4g2646 480 PANTHER OS04G0344100 PROTEIN-RELATED 53 343 - -
Sto4g2646 480 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 61 243 IPR008930 -
Sto4g2646 480 Pfam Terpene synthase, N-terminal domain 122 219 IPR001906 GO:0010333|GO:0016829
Sto4g2646 480 PANTHER TRICYCLENE SYNTHASE, CHLOROPLASTIC 344 466 - -
Sto4g2646 480 PANTHER TRICYCLENE SYNTHASE, CHLOROPLASTIC 53 343 - -
Sto4g2646 480 Gene3D Farnesyl Diphosphate Synthase 260 343 IPR008949 -
Sto4g2646 480 Gene3D Farnesyl Diphosphate Synthase 344 471 IPR008949 -
Sto4g2646 480 CDD Terpene_cyclase_plant_C1 55 460 IPR044814 GO:0010333|GO:0016102
Sto4g2646 480 Pfam Terpene synthase family, metal binding domain 343 461 IPR005630 GO:0000287|GO:0010333|GO:0016829
Sto4g2646 480 SUPERFAMILY Terpenoid synthases 247 461 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2646 Sto-Chr4 27602216 27605538 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2646 - - qsu:112022385 411.764