Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2584 ATGACTGAAAAAGTTCAAAACAAGCCTGAACAGAACAATCAAGAACAAAACTTGGAGAATTGGTTGCCCATAACTGCATCTCGAAAAGCAAAATGGTGGTATTCAACTTTTCATAATATCACAGCTTTGGTAGGTGCTGGTGTGCTAGGCTTGCCATATGCAGTTTCACAATTGGGATGGACTGCGGGTATCATAGCAATCATGATGTCATGGCTAATCACTTTCTATACATTATGGTTACTGGTTGAGATGCATGAAATCGTTCCTGGAAAAAGGTTCGATAGATATCACCAACTAGGGGAATATGCATTAGGACCCAAACTTGGGTATTGGATGGTTACCACAATGCAACTCACTGTTCAAGTGGCTACAAGCATTGTGTATTCTGTGACTGGTGGAAGCTCTCTGAAGAAAGCCCTTGATCTTATATGGCCACAAATAAGTGGCGTCAGAGAAACTTATTACATCATCATGTTTGTGGTCCTTCAGCTTCTGCTCTCACAAACTCCAAACTTCAATAAGTTGAAAATAGTTTCCCTCACTGCGGCCATCATGTCCATCTTTTATTCAATGACTGCTTTTGTAGCATCATTGGTGAAGGGGATTGGGCATCATCCAAGTGAGTACACAATTCGATCACACACTACTCCTGGTCAAGTGTTTGATGTCTTCAATGCACTCGGGACAATCGCATTTGCATTTGCCGGACACAGTGTGGTCCTGGAAATCCAGGCCACATTGCCCTCTACACCAGAGATACCCTCCAAAAAGCCCATGTGGAGAGGTTTAGTAGCAGCATATTTCGTTGTTATAGCTTGCTATCTTCTAGTTGCAATTTCTGGGTATTGGGCTTTTGGGGCCCATGTAGAAGACAATGTCCTTCTCTCACTTGAACATCCAAAATGGATCATTGCTGCTGCTAACTTCATGGTCTTATTTCATGTCATAGGAAGCTATCAGGTTTTTGCTATGCCTATTTTCGATACGATTGAatcctttttggtgcaaaagaGAAATTTTGCTCCTTCGAGAACTCTTCGTGTTATCTCTCGAAGTGCATTTGTTGTTGTGATAGGAATAGTTGCTATCATTATTCCCTTTTTTGGAGGACTTTTAGGATTCTTTGGAGGACTTGCATTTGTATCAACTGCATATATTTTGCCAAGTATTCTATGGCTTGCAATCACAAAACCCAAGCGATGGAGCCTTCATTGGAATTTATCAATGttTTGTGCTATTTGCGGAGTTTTGATTGCATGCGTGGCACCCATTGGAGGGATTCGTACAATTATTGTTTCTGCCAAAACTTACAAGATGTTTTCTTAA 1326 0.405 MTEKVQNKPEQNNQEQNLENWLPITASRKAKWWYSTFHNITALVGAGVLGLPYAVSQLGWTAGIIAIMMSWLITFYTLWLLVEMHEIVPGKRFDRYHQLGEYALGPKLGYWMVTTMQLTVQVATSIVYSVTGGSSLKKALDLIWPQISGVRETYYIIMFVVLQLLLSQTPNFNKLKIVSLTAAIMSIFYSMTAFVASLVKGIGHHPSEYTIRSHTTPGQVFDVFNALGTIAFAFAGHSVVLEIQATLPSTPEIPSKKPMWRGLVAAYFVVIACYLLVAISGYWAFGAHVEDNVLLSLEHPKWIIAAANFMVLFHVIGSYQVFAMPIFDTIESFLVQKRNFAPSRTLRVISRSAFVVVIGIVAIIIPFFGGLLGFFGGLAFVSTAYILPSILWLAITKPKRWSLHWNLSMFCAICGVLIACVAPIGGIRTIIVSAKTYKMFS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2584 441 PANTHER OS05G0424000 PROTEIN-RELATED 8 436 - -
Sto4g2584 441 Pfam Transmembrane amino acid transporter protein 29 425 IPR013057 -
Sto4g2584 441 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 5 8 436 - -
Sto4g2584 441 Gene3D Amino acid/polyamine transporter I 25 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2584 Sto-Chr4 27081026 27084018 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2584 14 441 Organic Solute Cotransporters AT1G24400 58.508 3.30e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2584 - - jcu:105638214 609.372