Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2554 ATGGCTGAGGAAACCCAGAAACCGGCTGAGGAGGTGGTGGTTGTAGCTGAGGCTGAGAAATCTGTCACTGAGAAGCCCGTTGAGGACAAGAAACCTGATGAGCCGGTGCCGGAGGTTACAGAGAAGCCGGCGGAGGAGCCCGAGAAGCCCGCCGTCGTTGAGGAGGTAGTTGTCGCGGAGGCGGAGAAACCTAAGATTACTCAATCGGTTTCTTTCAAGGAGGAGAGCAACGTCGTCTCCGAACTCCCTGAGGCTCAGAAGAAGGCGCTCGATGAGCTGAAGCAGCTTATTCAAGAGTCGCTTAATAAGCACGAGGAGCCTAAAACCGAAGAGAAAACCGAAGGGGAGGCTCCTAAGGAGGAAGCGACTCCAGTTGTAGAAGAGCCACCGAAAGCTGAAGCAGAGACTGTGACAgaagagaaaagggaagaagagAAGCCTACACCTGAACCCGTCGTTGTCACAGAGGTGGTAGAAAAAGCTACTGTGGAAGAAGACGGTACTAAGACAGTGGAAGCTATCAAGGAGAGCATAGTCTCAGTCTCTGAGGAGGCACCGGCAGAAGCACCTTCAGCAGCGCCGGAGCCGAAGCCGGAGGTGGAGGAGGTGGTTGCGCCGCCGCCAGAGGAGGTTTCGATCTGGGGAATTCCCCTGCTGGCGGATGAGAGGAGCGACGTGATTCTGCTAAAATTCCTCAGAGCAAGGGATTTCAAGGTGAAGGATGCCTTCACGATGATCAAGAACACCGCGCGTTGGCGAAAGGAGTTCGGCATCGACGCGCTCGTGGAGGAGGATCTCGGAACTGATTGGGACAAGTTGGTGTTCACTCATGGGTTCGACAAAGAAGGCCATCCAGTTTGCTACAACGTGTTCGGGGAGTTTGAGAACAAGGAGTTGTATCAGAAGACGTTCTCTGATGAGGAGAAGCGTCAGAAGTTCATCAGATGGAGGATTCAGTTCTTGGAGAAGAGTGTTAGGAAATTTGACTACACTCCTACTGGTATTGTCACTATTGTTCAGGTCAATGATCTCAAGAATTCACCTGGACTTGGTAAGAGAGAACTCAGACAAGCAACCAATCAAGCTCTTCAATTGTTCCAGGATAACTATCCTGAGTTTGTAGCCAAGCAGGTGTTTGTCAATGTTCCTTGGTGGTACCTCGCTTTTTCAAGGATGATCAGTCCTTTCCTGACACAAAGGACCAAAAGCAAGTTTGTATTTGCTGGTCCTTCCAAATCTGCTGAGACCCTTTTCAAATATATAGCTCCTGAGCAAGTACCTGTCCAGTATGGTGGATTAAGCAAGGAAGGTGAGAATGAATTCACAACTGCTGACCCTGCTACAGAGTTCATAATCAAACCATCAACAAAGCATATTGTTGAATTCCCAGTTTCTGAGACAAGCAATCTGGTTTGGGAAGTCAGAGTTGTGGGGTGGGATGTGAACTACGGGGCTGAATTTGTGCCAAGTGCTGAGGATAAATACACTGTGATAGTACAGAAGAGCAGGAAAATTACTGCTGCTGATGAAACAGTAATTAGTAACAGCTTTAAAGTTGGGGAGCCTGGGAAGGTGGTGCTCACCTTTGATAACCAGacatccaagaagaagaaactccTGTACAGGTTCAAGACCAAACCTATCTCTGAGTAG 1653 0.4803 MAEETQKPAEEVVVVAEAEKSVTEKPVEDKKPDEPVPEVTEKPAEEPEKPAVVEEVVVAEAEKPKITQSVSFKEESNVVSELPEAQKKALDELKQLIQESLNKHEEPKTEEKTEGEAPKEEATPVVEEPPKAEAETVTEEKREEEKPTPEPVVVTEVVEKATVEEDGTKTVEAIKESIVSVSEEAPAEAPSAAPEPKPEVEEVVAPPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTARWRKEFGIDALVEEDLGTDWDKLVFTHGFDKEGHPVCYNVFGEFENKELYQKTFSDEEKRQKFIRWRIQFLEKSVRKFDYTPTGIVTIVQVNDLKNSPGLGKRELRQATNQALQLFQDNYPEFVAKQVFVNVPWWYLAFSRMISPFLTQRTKSKFVFAGPSKSAETLFKYIAPEQVPVQYGGLSKEGENEFTTADPATEFIIKPSTKHIVEFPVSETSNLVWEVRVVGWDVNYGAEFVPSAEDKYTVIVQKSRKITAADETVISNSFKVGEPGKVVLTFDNQTSKKKKLLYRFKTKPISE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2554 550 PRINTS Cellular retinaldehyde-binding protein signature 227 249 - -
Sto4g2554 550 PRINTS Cellular retinaldehyde-binding protein signature 390 409 - -
Sto4g2554 550 CDD SEC14 269 433 IPR001251 -
Sto4g2554 550 Pfam CRAL/TRIO, N-terminal domain 209 248 IPR011074 -
Sto4g2554 550 Gene3D GOLD domain 452 545 - -
Sto4g2554 550 SUPERFAMILY CRAL/TRIO N-terminal domain 71 265 IPR036273 -
Sto4g2554 550 SUPERFAMILY CRAL/TRIO domain 274 435 IPR036865 -
Sto4g2554 550 MobiDBLite consensus disorder prediction 96 150 - -
Sto4g2554 550 MobiDBLite consensus disorder prediction 1 51 - -
Sto4g2554 550 PANTHER PATELLIN-LIKE PROTEIN 1 550 - -
Sto4g2554 550 Pfam CRAL/TRIO domain 272 432 IPR001251 -
Sto4g2554 550 SMART CRAL_TRIO_N_2 224 249 IPR011074 -
Sto4g2554 550 MobiDBLite consensus disorder prediction 180 200 - -
Sto4g2554 550 ProSiteProfiles GOLD domain profile. 414 545 IPR009038 -
Sto4g2554 550 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 263 438 IPR001251 -
Sto4g2554 550 PANTHER PATELLIN-1 1 550 IPR044834 GO:0008289
Sto4g2554 550 MobiDBLite consensus disorder prediction 96 151 - -
Sto4g2554 550 SMART sec14_4 267 435 IPR001251 -
Sto4g2554 550 MobiDBLite consensus disorder prediction 13 51 - -
Sto4g2554 550 Gene3D - 163 451 IPR036865 -
Sto4g2554 550 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 449 543 IPR036598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2554 Sto-Chr4 26867723 26870370 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2554 228 427 Acyl Lipid Metabolism Gene Families AT1G55840 29.954 4.46e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2554 - K19996 csin:114262871 637.876