Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2496 ATGGATGAAAACCAGCCCTCTCCACCTCGCAGGAAGGAAAGTCCAATTCTGAGAAATCTCAAGTCATTTCTTCGAACAAGATTCAGATCGTCATTCTCTCTGACTTCGATTTTTTCTCTGCAGGTCAAGTGCGCTCCGAGATCGCCACCAAGCACGAAGCCCAGACCTACCGCGGCGAAAACTGAAGCAGGTGATGAAGGTGACGGAGGAAGCGCACAGGCTCAAGCTCCCATACGTCATTTTAGTGAGAGGTTCACAAGATCTGGTTCTAAAGCAGAAACAAAATTGAGAACTATTTTCGAGCCTTTTGAAGTGGAACTGGTAAATGAAGAGTTTGAAGCAGCAAATGTGCAAGTAGCATTTGGTCCTGGAGCTAGTTCAGCGCAATCTCTACGGTCATATGGTAACAATAAGGGAGTGAATAGTGAAAAAAGCAGCGGTTCGGCGTCAAAAGCTTCCGGTCGGGAGGAAGATGTTTTAGCATTGCCTTCAACTGCTATAGAGGATCAAACTGATGCTTGTATGATAGATGCTACTGATGCTGCCATTGATGCATCCTCAgttcagaaaataaaaaaagagtacaaggAACCATGGGATTATCAGTCCTCTTACTATCCTACTAGTCTTCCTCAAAGGAAGCCTAATTCTGGAGACCCAAaAGAATCTGGGGAGGCTGCTAATAGTGTAGAGTATGATGAGAATACTGTTAATTCTGCTGCAGAACTTGGGCTCTTGGACCAAAATGAGCAAAAAAGGATGCTCTTATTTCAGCTTCCTTCTCTGCCATTGGCGAAAGGGGGTGCGTCTGAAGCAACCACAAAGGGGTCCACCCTGGAAGACTTGTCAAGGGGATTCATGGGCAAAATGCTGGTGTACAAGAGTGGAGCAGTCAAATTGAAGCTTGGAGAAACCCTATATGATGTCTCTCCGGGTTCAAATGTTGAATTTGCCGAAGATGTTGTGGCAATGGACACTGCAGAAAAAAACTGCTGTGTTCTTGGGGAGCTTGAGAAAAGAGCCATTGTAACCCCTGATGTTGATTCAATTGAACTCTGA 1059 0.4429 MDENQPSPPRRKESPILRNLKSFLRTRFRSSFSLTSIFSLQVKCAPRSPPSTKPRPTAAKTEAGDEGDGGSAQAQAPIRHFSERFTRSGSKAETKLRTIFEPFEVELVNEEFEAANVQVAFGPGASSAQSLRSYGNNKGVNSEKSSGSASKASGREEDVLALPSTAIEDQTDACMIDATDAAIDASSVQKIKKEYKEPWDYQSSYYPTSLPQRKPNSGDPKESGEAANSVEYDENTVNSAAELGLLDQNEQKRMLLFQLPSLPLAKGGASEATTKGSTLEDLSRGFMGKMLVYKSGAVKLKLGETLYDVSPGSNVEFAEDVVAMDTAEKNCCVLGELEKRAIVTPDVDSIEL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2496 352 MobiDBLite consensus disorder prediction 126 164 - -
Sto4g2496 352 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1 115 350 - -
Sto4g2496 352 PANTHER DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4-LIKE ISOFORM X1 40 95 - -
Sto4g2496 352 MobiDBLite consensus disorder prediction 202 216 - -
Sto4g2496 352 MobiDBLite consensus disorder prediction 43 89 - -
Sto4g2496 352 PANTHER DNA-DIRECTED RNA POLYMERASE III 115 350 IPR007811 GO:0003677|GO:0005666|GO:0006383
Sto4g2496 352 PANTHER DNA-DIRECTED RNA POLYMERASE III 40 95 IPR007811 GO:0003677|GO:0005666|GO:0006383
Sto4g2496 352 Pfam RNA polymerase III RPC4 207 347 IPR007811 GO:0003677|GO:0005666|GO:0006383
Sto4g2496 352 MobiDBLite consensus disorder prediction 126 149 - -
Sto4g2496 352 MobiDBLite consensus disorder prediction 202 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2496 Sto-Chr4 26348992 26354389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2496 K03026 - gmx:100787575 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2496 4 26348992 26354389 Sto4g2496 4 26348992 26354389 ECH