Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2494 ATGTCAACTAAGGTGGTGTTAAACTGGTCACTCTATTTTGCTAATTGTTCTGTTCCTGCTTTTGATATTGCGGTACCAGCTACACAAATCTTGTCAAGGGGAATTCcatttatatttaatacatgGGTTATAAGGCGTCTCACTGAAGAGGACTATGCGCTATATGCAGTGCAGTTTCATCTTTTTGTCACTTGTGTTTTGTTTCTTAGTCGGGAGGGATTCCGCCGCGCATGCATGCGGATGGACATGAAACGTTCTTATATTATGAATGTTTCATGTTATAGTGACGGCACTTCAATGGAAAAAGATGTTGTCAAACTAATGAGAGTAGCTTGGATGAGTCTTCCGCTTGGGATGTTTATGACAGTTGTTGCTTGCTTATTAGTATTCTGGTGGCAAGATATAAGTTATTCCAGTCCACATGGGCAGGCTATCTTGATTAATGGTTTTGCATGTATATTGGAGCTTTTGGTTGAGCCTTTATATATTCTTTCACAGAACTTGGTTTTGCTTGAATTGCGGTTGATGGTTGAGACATTGGCAACAGTTTCTCGATGCATGACAATGTACTTCCTTATTGTCAAGCAAACAGGAATGGCAAAATCAATTATATTTGCGTTGTCACAATCTGCATATGGAGCTGGCTTATTTCTTGGTTATTGGGGCTATCTGGTTCTCTTCCGTAAATTTAGAGGTTCTTACATTTTCCCCTTCAGAGAAGGGAAAGTAATTGACTTTGACAGGCAGCTGTCCAAGATGTGTATGCTGTTTACCTTTCAATCTTTTCGGAAGTTAATCCTTCAGGAAGGAGAAAAGATGGTACTTGTATGGTTAGATACACCATATAATCAAGCTGTATATGGTCTTGTGGACAAATTAGGTAGCTTAGTGGTGAGAATGGTGTTTTTACCATTTGAAGAAAGTTCATATGCAACCTTTGCAAGGTCTGCTTCAGGACAATACCCAGCAAAAAGCAAAAAACTGGGAAACTGCCTTACAGAATCCCTTAAGTTAGTTTTGTTAATTGGTCTTATTTTTATGGCATTTGGTCCAAGTTATTCTTATTCGCTCATTAGATTGCTGTATGGCGAAAAATGGAGTGATGGAGAAGCATCAACTGCCCTCCAATATTATTGCATTTATGTTATTGTTTTGGCCATGAACGGAACCTCTGAAGCGTTTCTTCATGCAGTTGCAACAGAAAGCCAACTCAAACGTTCAAATGATTCATTACTCGTGTTctctataatttatataattttgaatgtCTTACTAATAAAGTTAGCCGGGGCAGTTGGCTTAATTATGGCAAATTCTCTGAATATGACCTTGAGGATAATCTACTCAGCTATATTCATAAAGCGCTATTTCCAGGGAACTTCGGCATTTTCCTTCTCTGACTGCTTGCCTTCAGGATGGACTGTTCTGTTGCTTTCTGGTctaTTGCCGGGAGAAACCTTTCATCAAAAGAATTATCCACTTCCGCGATCACTCAGactagaaattttgaaatttagcTTCAAGTTAGAGGAAGAGAATGACTCATTAGTTGGCTGTTCATGGAATGATAGCTTGTCTCAAGCATAG 1587 0.3793 MSTKVVLNWSLYFANCSVPAFDIAVPATQILSRGIPFIFNTWVIRRLTEEDYALYAVQFHLFVTCVLFLSREGFRRACMRMDMKRSYIMNVSCYSDGTSMEKDVVKLMRVAWMSLPLGMFMTVVACLLVFWWQDISYSSPHGQAILINGFACILELLVEPLYILSQNLVLLELRLMVETLATVSRCMTMYFLIVKQTGMAKSIIFALSQSAYGAGLFLGYWGYLVLFRKFRGSYIFPFREGKVIDFDRQLSKMCMLFTFQSFRKLILQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRMVFLPFEESSYATFARSASGQYPAKSKKLGNCLTESLKLVLLIGLIFMAFGPSYSYSLIRLLYGEKWSDGEASTALQYYCIYVIVLAMNGTSEAFLHAVATESQLKRSNDSLLVFSIIYIILNVLLIKLAGAVGLIMANSLNMTLRIIYSAIFIKRYFQGTSAFSFSDCLPSGWTVLLLSGLLPGETFHQKNYPLPRSLRLEILKFSFKLEEENDSLVGCSWNDSLSQA 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2494 528 CDD MATE_rft1 27 459 - -
Sto4g2494 528 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 27 481 IPR007594 GO:0006488|GO:0016021
Sto4g2494 528 Pfam Rft protein 28 479 IPR007594 GO:0006488|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2494 Sto-Chr4 26335859 26342041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g2494 K06316 - gmx:100811128 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2494 4 26335859 26342041 Sto4g2494 4 26335859 26342041 ECH